Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GCDH
  • Mouse genes Gcdh
  • Rat genes Gcdh
  • Zfish genes gcdha,gcdhb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gcdh

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000062	fatty-acyl-CoA binding	Gcdh	IDA		Rat	PMID:2899130|RGD:1598698
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	Gcdh	IDA		Rat	PMID:6895440|RGD:1598697
Molecular Function	GO:0004361	glutaryl-CoA dehydrogenase activity	GCDH	IDA		Human	PMID:8541831
Molecular Function	GO:0004361	glutaryl-CoA dehydrogenase activity	Gcdh	IDA		Rat	PMID:2899130|RGD:1598698
Molecular Function	GO:0004361	glutaryl-CoA dehydrogenase activity	Gcdh	IDA		Rat	PMID:6895440|RGD:1598697
Cellular Component	GO:0005743	mitochondrial inner membrane	Gcdh	HDA		Mouse	PMID:12865426
Cellular Component	GO:0005739	mitochondrion	GCDH	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Gcdh	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Gcdh	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Gcdh	IDA		Rat	PMID:6895440|RGD:1598697
Biological Process	GO:0006637	acyl-CoA metabolic process	Gcdh	IDA		Rat	PMID:6895440|RGD:1598697
Biological Process	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	GCDH	IDA		Human	PMID:25416781
Biological Process	GO:0019395	fatty acid oxidation	Gcdh	IDA		Rat	PMID:2899130|RGD:1598698
Biological Process	GO:0046949	fatty-acyl-CoA biosynthetic process	Gcdh	IDA		Rat	PMID:6895440|RGD:1598697

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern