Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GCNT1
  • Mouse genes Gcnt1
  • Rat genes Gcnt1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gcnt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003829	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity	Gcnt1	IDA		Mouse	MGI:MGI:6879401|PMID:22056345
Molecular Function	GO:0003829	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity	Gcnt1	IDA		Mouse	MGI:MGI:6869995|PMID:12954635
Molecular Function	GO:0003829	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity	Gcnt1	IDA		Rat	PMID:7560067|RGD:632804
Molecular Function	GO:0005515	protein binding	GCNT1	IPI	UniProtKB:Q9H4A6	Human	PMID:23027862
Cellular Component	GO:0005615	extracellular space	Gcnt1	IDA		Rat	PMID:9621114|RGD:2317801
Cellular Component	GO:0031985	Golgi cisterna	GCNT1	IDA		Human	PMID:23027862
Cellular Component	GO:0005802	trans-Golgi network	GCNT1	IDA		Human	PMID:23027862
Biological Process	GO:0060352	cell adhesion molecule production	GCNT1	IMP		Human	PMID:23027862
Biological Process	GO:0009101	glycoprotein biosynthetic process	GCNT1	IMP		Human	PMID:23027862
Biological Process	GO:0060993	kidney morphogenesis	Gcnt1	IGI	MGI:MGI:2684919	Mouse	PMID:19349303
Biological Process	GO:0060993	kidney morphogenesis	Gcnt1	IGI	MGI:MGI:1919327	Mouse	PMID:19349303
Biological Process	GO:0050901	leukocyte tethering or rolling	GCNT1	IMP		Human	PMID:23027862
Biological Process	GO:0016268	O-glycan processing, core 2	GCNT1	IDA		Human	PMID:1329093
Biological Process	GO:0016268	O-glycan processing, core 2	Gcnt1	IMP		Mouse	MGI:MGI:2679759|PMID:9881978
Biological Process	GO:1903238	positive regulation of leukocyte tethering or rolling	Gcnt1	IMP		Mouse	MGI:MGI:2679759|PMID:9881978
Biological Process	GO:0032868	response to insulin	Gcnt1	IEP		Rat	PMID:7560067|RGD:632804
Biological Process	GO:0048729	tissue morphogenesis	Gcnt1	IGI	MGI:MGI:2684919	Mouse	PMID:19349303
Biological Process	GO:0048729	tissue morphogenesis	Gcnt1	IGI	MGI:MGI:1919327	Mouse	PMID:19349303

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern