Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GDF1
  • Mouse genes Gdf1
  • Rat genes Gdf1
  • Zfish genes gdf3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gdf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0032991	protein-containing complex	gdf3	IPI	ZFIN:ZDB-GENE-990415-256	Zfish	PMID:29140251
Cellular Component	GO:0032991	protein-containing complex	gdf3	IPI	ZFIN:ZDB-GENE-990415-181	Zfish	PMID:29140251
Biological Process	GO:0009798	axis specification	gdf3	IMP	ZFIN:ZDB-GENO-181002-8	Zfish	PMID:29140249
Biological Process	GO:0030509	BMP signaling pathway	gdf3	IMP	ZFIN:ZDB-GENO-181002-11	Zfish	PMID:29140250
Biological Process	GO:0060027	convergent extension involved in gastrulation	gdf3	IMP	ZFIN:ZDB-MRPHLNO-171103-2	Zfish	PMID:24892953
Biological Process	GO:0060027	convergent extension involved in gastrulation	gdf3	IGI	ZFIN:ZDB-GENE-030131-7093	Zfish	PMID:24892953
Biological Process	GO:0060027	convergent extension involved in gastrulation	gdf3	IMP	ZFIN:ZDB-MRPHLNO-100312-2	Zfish	PMID:24892953
Biological Process	GO:0007492	endoderm development	Gdf1	IGI	MGI:MGI:95686	Mouse	PMID:17936261
Biological Process	GO:0001947	heart looping	gdf3	IMP	ZFIN:ZDB-MRPHLNO-100312-2	Zfish	PMID:22613031
Biological Process	GO:0001701	in utero embryonic development	Gdf1	IMP	MGI:MGI:2181719	Mouse	PMID:17936261
Biological Process	GO:0060972	left/right pattern formation	gdf3	IMP	ZFIN:ZDB-MRPHLNO-100312-2	Zfish	PMID:29140250
Biological Process	GO:0007498	mesoderm development	Gdf1	IGI	MGI:MGI:95686	Mouse	PMID:17936261
Biological Process	GO:0048666	neuron development	gdf3	IMP	ZFIN:ZDB-MRPHLNO-100312-2	Zfish	PMID:22613031
Biological Process	GO:0038092	nodal signaling pathway	gdf3	IMP	ZFIN:ZDB-GENO-181002-11	Zfish	PMID:29140250
Biological Process	GO:0038092	nodal signaling pathway	gdf3	IMP	ZFIN:ZDB-GENO-181004-3	Zfish	PMID:29140251
Biological Process	GO:1904086	regulation of epiboly involved in gastrulation with mouth forming second	gdf3	IMP		Zfish	PMID:24892953|ZFIN:ZDB-PUB-140604-3
Biological Process	GO:1900145	regulation of nodal signaling pathway involved in determination of left/right asymmetry	gdf3	IMP	ZFIN:ZDB-MRPHLNO-140117-1	Zfish	PMID:23791819
Biological Process	GO:0007165	signal transduction	Gdf1	IGI	MGI:MGI:95686	Mouse	PMID:17936261
Biological Process	GO:0007165	signal transduction	Gdf1	IMP	MGI:MGI:2181719	Mouse	PMID:17936261

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern