Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GMEB2
  • Mouse genes Gmeb2
  • Rat genes Gmeb2
  • Zfish genes gmeb2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gmeb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Gmeb2	IDA		Rat	PMID:10894151|RGD:12911012
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Gmeb2	IDA		Rat	PMID:14705952|RGD:12911007
Molecular Function	GO:0042802	identical protein binding	GMEB2	IPI	UniProtKB:Q9UKD1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:O00311	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:P54253	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:P78424	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q13114	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q14192	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q7Z3K3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q96E35	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q96LK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q9BRK3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q9BXW4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q9H8S9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMEB2	IPI	UniProtKB:Q9UNY4-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Gmeb2	IPI	UniProtKB:Q9Y692-2	Rat	PMID:10894151|RGD:12911012
Molecular Function	GO:0043565	sequence-specific DNA binding	Gmeb2	IDA		Rat	PMID:10894151|RGD:12911012
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	GMEB2	IDA		Human	PMID:28473536
Cellular Component	GO:0005829	cytosol	GMEB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GMEB2	IDA		Human	GO_REF:0000052
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Gmeb2	IDA		Rat	PMID:10894151|RGD:12911012
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Gmeb2	IDA		Rat	PMID:14705952|RGD:12911007

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern