Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNL3
  • Mouse genes Gnl3
  • Rat genes Gnl3
  • Zfish genes gnl3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gnl3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005525	GTP binding	Gnl3	IDA		Mouse	PMID:17158916
Molecular Function	GO:0005525	GTP binding	Gnl3	IMP		Rat	PMID:15657390|RGD:8554295
Molecular Function	GO:0048027	mRNA 5'-UTR binding	GNL3	IDA		Human	PMID:16213212
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q15172	Human	PMID:16097049
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q9UKV8	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:P54274	Human	PMID:19487455
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q00987	Human	PMID:21132010
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:P40763	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:P54274	Human	PMID:22641345
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:O14746	Human	PMID:24550003
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q9UKV8	Human	PMID:24550003
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q96LK0	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	GNL3	IPI	UniProtKB:Q96LK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Gnl3	IPI	PR:Q8BVY0	Mouse	PMID:17158916
Molecular Function	GO:0005515	protein binding	Gnl3	IPI	UniProtKB:P10361	Rat	PMID:12464630|RGD:633365
Molecular Function	GO:0003723	RNA binding	GNL3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	GNL3	HDA		Human	PMID:22681889
Cellular Component	GO:0005694	chromosome	GNL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005615	extracellular space	GNL3	HDA		Human	PMID:22664934
Cellular Component	GO:0016020	membrane	GNL3	HDA		Human	PMID:19946888
Cellular Component	GO:0030496	midbody	GNL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	GNL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	GNL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	GNL3	IDA		Human	PMID:22641345
Cellular Component	GO:0005730	nucleolus	Gnl3	IDA		Mouse	PMID:17158916
Cellular Component	GO:0005730	nucleolus	Gnl3	IDA		Mouse	PMID:12464630
Cellular Component	GO:0005730	nucleolus	Gnl3	IDA		Rat	PMID:12464630|RGD:633365
Cellular Component	GO:0005730	nucleolus	Gnl3	IDA		Rat	PMID:15657390|RGD:8554295
Cellular Component	GO:0005654	nucleoplasm	Gnl3	IDA		Mouse	PMID:17158916
Cellular Component	GO:0005634	nucleus	Gnl3	IDA		Rat	PMID:15657390|RGD:8554295
Biological Process	GO:0008283	cell population proliferation	Gnl3	IDA		Rat	PMID:12464630|RGD:633365
Biological Process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	gnl3	IMP	ZFIN:ZDB-GENO-110907-2	Zfish	PMID:24211311
Biological Process	GO:0003407	neural retina development	gnl3	IMP	ZFIN:ZDB-GENO-110907-2	Zfish	PMID:21565180
Biological Process	GO:1902895	positive regulation of miRNA transcription	GNL3	IMP		Human	PMID:25569094
Biological Process	GO:1904816	positive regulation of protein localization to chromosome, telomeric region	GNL3	IMP		Human	PMID:22641345
Biological Process	GO:0033235	positive regulation of protein sumoylation	GNL3	IMP		Human	PMID:22641345
Biological Process	GO:0032206	positive regulation of telomere maintenance	GNL3	IMP		Human	PMID:22641345
Biological Process	GO:0042127	regulation of cell population proliferation	Gnl3	IMP		Rat	PMID:12464630|RGD:633365
Biological Process	GO:0007096	regulation of exit from mitosis	gnl3	IMP	ZFIN:ZDB-GENO-110907-2	Zfish	PMID:21565180
Biological Process	GO:0045664	regulation of neuron differentiation	gnl3	IMP	ZFIN:ZDB-GENO-110907-2	Zfish	PMID:21565180
Biological Process	GO:0017145	stem cell division	GNL3	IDA		Human	PMID:25522312
Biological Process	GO:0019827	stem cell population maintenance	GNL3	IMP		Human	PMID:25522312

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern