Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNPDA1
  • Mouse genes Gnpda1
  • Rat genes Gnpda1
  • Zfish genes gnpda1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gnpda1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004342	glucosamine-6-phosphate deaminase activity	GNPDA1	IDA		Human	PMID:21807125
Molecular Function	GO:0004342	glucosamine-6-phosphate deaminase activity	GNPDA1	IMP		Human	PMID:9438414
Molecular Function	GO:0005515	protein binding	GNPDA1	IPI	UniProtKB:P43364-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPDA1	IPI	UniProtKB:Q9NRG1	Human	PMID:25416956
Cellular Component	GO:0005737	cytoplasm	Gnpda1	IDA		Mouse	MGI:MGI:1345525|PMID:10481053
Cellular Component	GO:0070062	extracellular exosome	GNPDA1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	GNPDA1	HDA		Human	PMID:19199708
Biological Process	GO:0006091	generation of precursor metabolites and energy	GNPDA1	IMP		Human	PMID:9438414
Biological Process	GO:0006043	glucosamine catabolic process	GNPDA1	IMP		Human	PMID:9438414
Biological Process	GO:0006048	UDP-N-acetylglucosamine biosynthetic process	GNPDA1	IMP		Human	PMID:26887390

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern