Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNPTAB
  • Mouse genes Gnptab
  • Rat genes Gnptab
  • Zfish genes gnptab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gnptab

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:P15622-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:P25786	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q86YD7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q8WTP8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q96FJ0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q9UJJ9	Human	PMID:26385638
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q9UJJ9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	GNPTAB	IPI	UniProtKB:Q8N6I4	Human	PMID:36074821
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	GNPTAB	IDA		Human	PMID:19955174
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	GNPTAB	IDA		Human	PMID:23733939
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	GNPTAB	IMP		Human	PMID:25505245
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	GNPTAB	IDA		Human	PMID:25788519
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	gnptab	IMP		Zfish	PMID:25505245|ZFIN:ZDB-PUB-141217-9
Molecular Function	GO:0003976	UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-2	Zfish	PMID:23733939
Cellular Component	GO:0005794	Golgi apparatus	GNPTAB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	GNPTAB	IDA		Human	PMID:21719679
Cellular Component	GO:0005794	Golgi apparatus	GNPTAB	IDA		Human	PMID:25505245
Cellular Component	GO:0005794	Golgi apparatus	GNPTAB	IDA		Human	PMID:25788519
Cellular Component	GO:0000139	Golgi membrane	GNPTAB	IDA		Human	PMID:23733939
Cellular Component	GO:0000139	Golgi membrane	GNPTAB	IDA		Human	PMID:24375680
Biological Process	GO:0060348	bone development	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-1	Zfish	PMID:26404503
Biological Process	GO:0060348	bone development	gnptab	IGI	ZFIN:ZDB-GENE-001205-4	Zfish	PMID:26404503
Biological Process	GO:0046835	carbohydrate phosphorylation	GNPTAB	IDA		Human	PMID:19955174
Biological Process	GO:0046835	carbohydrate phosphorylation	GNPTAB	IDA		Human	PMID:23733939
Biological Process	GO:0046835	carbohydrate phosphorylation	Gnptab	IMP	MGI:MGI:3757945	Mouse	PMID:17652091
Biological Process	GO:0051216	cartilage development	gnptab	IGI	ZFIN:ZDB-GENE-001205-4	Zfish	PMID:26404503
Biological Process	GO:0051216	cartilage development	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-2	Zfish	PMID:25505245
Biological Process	GO:0051216	cartilage development	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-1	Zfish	PMID:26404503
Biological Process	GO:0002063	chondrocyte development	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-1	Zfish	PMID:19834066
Biological Process	GO:0002063	chondrocyte development	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-2	Zfish	PMID:19834066
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-1	Zfish	PMID:19834066
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-2	Zfish	PMID:19834066
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	gnptab	IMP	ZFIN:ZDB-MRPHLNO-100302-2	Zfish	PMID:23733939
Biological Process	GO:0051649	establishment of localization in cell	Gnptab	IMP	MGI:MGI:3757945	Mouse	PMID:17652091
Biological Process	GO:0007040	lysosome organization	GNPTAB	IMP		Human	PMID:21719679
Biological Process	GO:0016256	N-glycan processing to lysosome	GNPTAB	IMP		Human	PMID:19938078
Biological Process	GO:0016256	N-glycan processing to lysosome	GNPTAB	IMP		Human	PMID:25505245
Biological Process	GO:0016256	N-glycan processing to lysosome	gnptab	IMP		Zfish	PMID:25505245|ZFIN:ZDB-PUB-141217-9
Biological Process	GO:0009306	protein secretion	Gnptab	IMP	MGI:MGI:3757945	Mouse	PMID:17652091
Biological Process	GO:0033299	secretion of lysosomal enzymes	Gnptab	IMP		Mouse	PMID:19710420

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern