Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GNS
  • Mouse genes Gns
  • Rat genes Gns
  • Zfish genes gnsa
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gns

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005539	glycosaminoglycan binding	Gns	IPI	PubChem_Compound:160936	Rat	PMID:3161730|RGD:1600571
Molecular Function	GO:0008449	N-acetylglucosamine-6-sulfatase activity	Gns	IDA		Rat	PMID:3161730|RGD:1600571
Molecular Function	GO:0005515	protein binding	GNS	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0043199	sulfate binding	Gns	IPI	PubChem_Compound:160936	Rat	PMID:3161730|RGD:1600571
Molecular Function	GO:0008484	sulfuric ester hydrolase activity	GNS	IDA		Human	PMID:15962010
Cellular Component	GO:0070062	extracellular exosome	GNS	HDA		Human	PMID:23533145
Cellular Component	GO:0005764	lysosome	Gns	IDA		Mouse	PMID:29514215
Cellular Component	GO:0005764	lysosome	Gns	IDA		Rat	PMID:3161730|RGD:1600571
Biological Process	GO:0042340	keratan sulfate catabolic process	Gns	IDA		Rat	PMID:3161730|RGD:1600571

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern