Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GSX2
  • Mouse genes Gsx2
  • Rat genes Gsx2
  • Zfish genes gsx2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gsx2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Gsx2	IDA		Mouse	PMID:7619729
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	GSX2	IMP		Human	PMID:31412107
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	GSX2	IDA		Human	PMID:28473536
Cellular Component	GO:0005737	cytoplasm	GSX2	IMP		Human	PMID:31412107
Cellular Component	GO:0005634	nucleus	GSX2	IMP		Human	PMID:31412107
Biological Process	GO:0007420	brain development	Gsx2	IGI	MGI:MGI:108067	Mouse	PMID:12930780
Biological Process	GO:0007417	central nervous system development	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11731457
Biological Process	GO:0007417	central nervous system development	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:12724834
Biological Process	GO:0021798	forebrain dorsal/ventral pattern formation	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11124115
Biological Process	GO:0021798	forebrain dorsal/ventral pattern formation	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:18701439
Biological Process	GO:0021798	forebrain dorsal/ventral pattern formation	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11060228
Biological Process	GO:0048853	forebrain morphogenesis	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:9398437
Biological Process	GO:0097154	GABAergic neuron differentiation	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11060228
Biological Process	GO:0048699	generation of neurons	Gsx2	IMP	MGI:MGI:4412067	Mouse	PMID:28814342
Biological Process	GO:0021575	hindbrain morphogenesis	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:9398437
Biological Process	GO:0048663	neuron fate commitment	Gsx2	IGI	MGI:MGI:95842	Mouse	PMID:16715081
Biological Process	GO:0048665	neuron fate specification	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:15930101
Biological Process	GO:0007219	Notch signaling pathway	Gsx2	IMP		Mouse	PMID:23042297
Biological Process	GO:0021772	olfactory bulb development	Gsx2	IMP	MGI:MGI:4412067	Mouse	PMID:28814342
Biological Process	GO:0021889	olfactory bulb interneuron differentiation	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11060228
Biological Process	GO:0007389	pattern specification process	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11731457
Biological Process	GO:0007389	pattern specification process	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:12724834
Biological Process	GO:0007389	pattern specification process	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:15930101
Biological Process	GO:0007389	pattern specification process	Gsx2	IGI	MGI:MGI:108067	Mouse	PMID:12930780
Biological Process	GO:0045747	positive regulation of Notch signaling pathway	Gsx2	IMP		Mouse	PMID:23042297
Biological Process	GO:0048714	positive regulation of oligodendrocyte differentiation	Gsx2	IMP		Mouse	PMID:23042297
Biological Process	GO:0030334	regulation of cell migration	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:18701439
Biological Process	GO:0002087	regulation of respiratory gaseous exchange by nervous system process	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:9398437
Biological Process	GO:0021527	spinal cord association neuron differentiation	Gsx2	IGI	MGI:MGI:95842	Mouse	PMID:16715081
Biological Process	GO:0021544	subpallium development	Gsx2	IGI	MGI:MGI:94902	Mouse	PMID:23042297
Biological Process	GO:0021544	subpallium development	Gsx2	IGI	MGI:MGI:94901	Mouse	PMID:23042297
Biological Process	GO:0060163	subpallium neuron fate commitment	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:11124115
Biological Process	GO:0021978	telencephalon regionalization	Gsx2	IMP	MGI:MGI:2150162	Mouse	PMID:18701439

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern