Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF3A
  • Mouse genes Gtf3a
  • Rat genes Gtf3a
  • Zfish genes gtf3aa,gtf3ab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf3a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008097	5S rRNA binding	GTF3A	IDA		Human	PMID:24120868
Molecular Function	GO:0003677	DNA binding	Gtf3a	IDA		Mouse	PMID:11814676
Molecular Function	GO:0003677	DNA binding	Gtf3a	IDA		Rat	PMID:11814676|RGD:632850
Molecular Function	GO:0005515	protein binding	Gtf3a	IPI	RGD:628886	Rat	PMID:10756201|RGD:6480517
Molecular Function	GO:0000995	RNA polymerase III general transcription initiation factor activity	Gtf3a	IDA		Rat	PMID:11814676|RGD:632850
Cellular Component	GO:0005654	nucleoplasm	GTF3A	IDA		Human	GO_REF:0000052
Biological Process	GO:0042273	ribosomal large subunit biogenesis	GTF3A	IMP		Human	PMID:24120868

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern