Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF3C1
  • Mouse genes Gtf3c1
  • Rat genes Gtf3c1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf3c1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GTF3C1	IPI	UniProtKB:Q9H063	Human	PMID:18377933
Molecular Function	GO:0005515	protein binding	GTF3C1	IPI	UniProtKB:P38935	Human	PMID:19299493
Molecular Function	GO:0005515	protein binding	GTF3C1	IPI	UniProtKB:Q1RN33	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GTF3C1	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GTF3C1	IPI	UniProtKB:Q96DZ9	Human	PMID:25416956
Molecular Function	GO:0000995	RNA polymerase III general transcription initiation factor activity	GTF3C1	IDA		Human	PMID:17409385
Cellular Component	GO:0016020	membrane	GTF3C1	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	GTF3C1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GTF3C1	IDA		Human	GO_REF:0000052
Cellular Component	GO:1990904	ribonucleoprotein complex	Gtf3c1	IDA		Mouse	PMID:19299493
Cellular Component	GO:0000127	transcription factor TFIIIC complex	GTF3C1	IDA		Human	PMID:17409385

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern