Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes H1-8
  • Mouse genes H1f8
  • Rat genes H1f8
  • Zfish genes h1m
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set H1f8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031492	nucleosomal DNA binding	H1f8	IDA		Mouse	MGI:MGI:5559660|PMID:22868987
Molecular Function	GO:0030527	structural constituent of chromatin	H1f8	IDA		Mouse	MGI:MGI:5559660|PMID:22868987
Cellular Component	GO:0000785	chromatin	h1m	IDA		Zfish	PMID:18507824
Cellular Component	GO:0070062	extracellular exosome	H1-8	HDA		Human	PMID:19056867
Cellular Component	GO:0001674	female germ cell nucleus	H1f8	IDA		Mouse	PMID:11171391
Cellular Component	GO:0005634	nucleus	H1f8	IDA		Mouse	MGI:MGI:5559660|PMID:22868987
Biological Process	GO:0040029	epigenetic regulation of gene expression	H1f8	IMP		Mouse	MGI:MGI:5559660|PMID:22868987

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern