Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes H2AB1,H2AB2,H2AB3
  • Mouse genes H2ab2
  • Rat genes H2ab3
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set H2ab2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	H2AB2	IPI	UniProtKB:Q14696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	H2AB2	IPI	UniProtKB:Q99880	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	H2AB2	IPI	UniProtKB:U3KQK0	Human	PMID:32296183
Cellular Component	GO:0000791	euchromatin	H2AB1	IDA		Human	PMID:22795134
Cellular Component	GO:0000791	euchromatin	H2AB2	IDA		Human	PMID:22795134
Cellular Component	GO:0000786	nucleosome	H2AB1	IDA		Human	PMID:22795134
Cellular Component	GO:0000786	nucleosome	H2AB2	IDA		Human	PMID:22795134
Cellular Component	GO:0005634	nucleus	H2AB1	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	H2AB2	HDA		Human	PMID:21630459
Biological Process	GO:0006397	mRNA processing	H2AB1	IMP		Human	PMID:22795134
Biological Process	GO:0006397	mRNA processing	H2AB2	IMP		Human	PMID:22795134
Biological Process	GO:0006334	nucleosome assembly	H2AB1	IDA		Human	PMID:22795134
Biological Process	GO:0006334	nucleosome assembly	H2AB2	IDA		Human	PMID:22795134

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern