Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes H2BC13,H2BC9
  • Mouse genes H2bc24
  • Rat genes
  • Zfish genes hist2h2l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set H2bc24

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	H2BC9	IPI	UniProtKB:Q8IXQ6	Human	PMID:26479788
Molecular Function	GO:0005515	protein binding	H2BC9	IPI	UniProtKB:P42224,UniProtKB:Q8IXQ6,UniProtKB:Q8TDB6	Human	PMID:26479788
Molecular Function	GO:0005515	protein binding	H2BC9	IPI	UniProtKB:Q05BL1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	H2BC9	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	H2BC9	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	H2BC13	IPI	UniProtKB:P0C5Z0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	H2BC13	IPI	UniProtKB:Q96CW1	Human	PMID:32296183
Molecular Function	GO:0097677	STAT family protein binding	H2BC9	IPI	UniProtKB:P42224	Human	PMID:26479788
Molecular Function	GO:0044389	ubiquitin-like protein ligase binding	H2BC9	IPI	UniProtKB:Q8TDB6	Human	PMID:26479788
Cellular Component	GO:0000785	chromatin	hist2h2l	IDA		Zfish	PMID:22155959
Cellular Component	GO:0005829	cytosol	H2BC9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	H2BC13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	H2BC9	HDA		Human	PMID:20458337
Cellular Component	GO:0070062	extracellular exosome	H2BC13	HDA		Human	PMID:20458337
Cellular Component	GO:0005654	nucleoplasm	H2BC9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	H2BC13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	H2BC9	IDA		Human	PMID:16319397
Cellular Component	GO:0005634	nucleus	H2BC9	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	H2BC13	IDA		Human	PMID:16319397
Cellular Component	GO:0005634	nucleus	H2BC13	HDA		Human	PMID:21630459
Cellular Component	GO:0032991	protein-containing complex	H2BC9	IDA		Human	PMID:26479788

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern