Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HDAC11
  • Mouse genes Hdac11
  • Rat genes Hdac11
  • Zfish genes hdac11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hdac11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004407	histone deacetylase activity	HDAC11	IDA		Human	PMID:11948178
Molecular Function	GO:0005515	protein binding	HDAC11	IPI	UniProtKB:P43246	Human	PMID:26221039
Molecular Function	GO:0005515	protein binding	HDAC11	IPI	UniProtKB:Q8IXM6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Hdac11	IPI	PR:Q02591	Mouse	PMID:17568773
Cellular Component	GO:0000118	histone deacetylase complex	HDAC11	IDA		Human	PMID:11948178
Cellular Component	GO:0005634	nucleus	HDAC11	IDA		Human	PMID:11948178
Cellular Component	GO:0005634	nucleus	Hdac11	IDA		Rat	PMID:18627006|RGD:2306445
Cellular Component	GO:0005886	plasma membrane	HDAC11	IDA		Human	GO_REF:0000054
Biological Process	GO:0016575	histone deacetylation	HDAC11	IDA		Human	PMID:11948178
Biological Process	GO:0014003	oligodendrocyte development	Hdac11	IMP		Rat	PMID:18627006|RGD:2306445

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern