Comparative GO Graph (mouse, human, rat)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Hnrnpa2b1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes HNRNPA2B1
- Mouse genes Hnrnpa2b1
- Rat genes Hnrnpa2b1
- Zfish genes
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hnrnpa2b1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070182	DNA polymerase binding	Hnrnpa2b1	IPI	UniProtKB:Q673L6	Rat	PMID:23184978\|RGD:11567256
Molecular Function	GO:0098505	G-rich strand telomeric DNA binding	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Molecular Function	GO:0035198	miRNA binding	HNRNPA2B1	IDA		Human	PMID:24356509
Molecular Function	GO:0140693	molecular condensate scaffold activity	HNRNPA2B1	IDA		Human	PMID:29358076
Molecular Function	GO:0003730	mRNA 3'-UTR binding	HNRNPA2B1	IDA		Human	PMID:10567417
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Hnrnpa2b1	IDA		Rat	PMID:10567417\|RGD:9685424
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Hnrnpa2b1	IDA		Rat	PMID:9578590\|RGD:9685477
Molecular Function	GO:1990715	mRNA CDS binding	Hnrnpa2b1	IDA		Rat	PMID:16980303\|RGD:10058976
Molecular Function	GO:1990247	N6-methyladenosine-containing RNA binding	HNRNPA2B1	IDA		Human	PMID:26321680
Molecular Function	GO:0097157	pre-mRNA intronic binding	Hnrnpa2b1	IDA		Mouse	PMID:18480465
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q9NZI8	Human	PMID:17289661
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q9HA38	Human	PMID:18519039
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P26651	Human	PMID:21784977
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q8IWS0	Human	PMID:22720776
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P14866	Human	PMID:23976881
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P14866-1	Human	PMID:23976881
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q96LT7	Human	PMID:24549040
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P62937	Human	PMID:25678563
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q5T7N2	Human	PMID:25702638
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q8WYQ5	Human	PMID:26321680
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P09651	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q14103	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:P09651	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q14103	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	HNRNPA2B1	IPI	UniProtKB:Q5T7N2	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	Hnrnpa2b1	IPI	RGD:71058	Rat	PMID:16518874\|RGD:10054427
Molecular Function	GO:0001069	regulatory region RNA binding	Hnrnpa2b1	IDA		Rat	PMID:9578590\|RGD:9685477
Molecular Function	GO:0003723	RNA binding	HNRNPA2B1	IDA		Human	PMID:15659580
Molecular Function	GO:0003723	RNA binding	HNRNPA2B1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	HNRNPA2B1	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Hnrnpa2b1	IPI	EMBL:JX682706	Mouse	PMID:23907535
Molecular Function	GO:0003723	RNA binding	Hnrnpa2b1	IDA		Rat	PMID:10567417\|RGD:9685424
Molecular Function	GO:0043047	single-stranded telomeric DNA binding	HNRNPA2B1	IDA		Human	PMID:15659580
Molecular Function	GO:0043047	single-stranded telomeric DNA binding	Hnrnpa2b1	IDA		Rat	PMID:15659580\|RGD:10680046
Cellular Component	GO:0015030	Cajal body	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Cellular Component	GO:0071013	catalytic step 2 spliceosome	HNRNPA2B1	IDA		Human	PMID:11991638
Cellular Component	GO:0000785	chromatin	Hnrnpa2b1	IDA		Rat	PMID:12415010\|RGD:9685478
Cellular Component	GO:0000781	chromosome, telomeric region	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Cellular Component	GO:0005737	cytoplasm	HNRNPA2B1	IDA		Human	PMID:24356509
Cellular Component	GO:0005737	cytoplasm	Hnrnpa2b1	IDA		Rat	PMID:9761751\|RGD:9685418
Cellular Component	GO:0070062	extracellular exosome	HNRNPA2B1	IDA		Human	PMID:24356509
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpa2b1	EXP		Rat	PMID:22238095\|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpa2b1	IDA		Rat	PMID:22238095\|RGD:155230714
Cellular Component	GO:0098978	glutamatergic synapse	Hnrnpa2b1	IDA		Rat	PMID:25286195\|RGD:13702460
Cellular Component	GO:0016020	membrane	HNRNPA2B1	HDA		Human	PMID:19946888
Cellular Component	GO:0043005	neuron projection	Hnrnpa2b1	IDA		Rat	PMID:12415010\|RGD:9685478
Cellular Component	GO:0043025	neuronal cell body	Hnrnpa2b1	IDA		Rat	PMID:12415010\|RGD:9685478
Cellular Component	GO:0071598	neuronal ribonucleoprotein granule	Hnrnpa2b1	IDA		Rat	PMID:14523087\|RGD:9685480
Cellular Component	GO:0016363	nuclear matrix	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Cellular Component	GO:0005654	nucleoplasm	HNRNPA2B1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	HNRNPA2B1	IDA		Human	PMID:22720776
Cellular Component	GO:0005634	nucleus	Hnrnpa2b1	IDA		Mouse	PMID:17962088
Cellular Component	GO:0005634	nucleus	Hnrnpa2b1	IDA		Mouse	PMID:18480465
Cellular Component	GO:0005634	nucleus	Hnrnpa2b1	IDA		Rat	PMID:10567417\|RGD:9685424
Cellular Component	GO:0005634	nucleus	Hnrnpa2b1	IDA		Rat	PMID:9761751\|RGD:9685418
Cellular Component	GO:0043204	perikaryon	Hnrnpa2b1	IDA		Rat	PMID:14991837\|RGD:9685479
Cellular Component	GO:0099524	postsynaptic cytosol	Hnrnpa2b1	IDA		Rat	PMID:25286195\|RGD:13702460
Cellular Component	GO:0014069	postsynaptic density	Hnrnpa2b1	EXP		Rat	PMID:22238095\|RGD:155230714
Cellular Component	GO:0014069	postsynaptic density	Hnrnpa2b1	IDA		Rat	PMID:22238095\|RGD:155230714
Cellular Component	GO:1990904	ribonucleoprotein complex	HNRNPA2B1	IDA		Human	PMID:17289661
Cellular Component	GO:1990904	ribonucleoprotein complex	HNRNPA2B1	IDA		Human	PMID:2557628
Cellular Component	GO:0005681	spliceosomal complex	HNRNPA2B1	IDA		Human	PMID:9731529
Biological Process	GO:0044806	G-quadruplex DNA unwinding	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Biological Process	GO:0030324	lung development	Hnrnpa2b1	IEP		Rat	PMID:9761751\|RGD:9685418
Biological Process	GO:0008584	male gonad development	Hnrnpa2b1	IEP		Rat	PMID:10978504\|RGD:9685421
Biological Process	GO:1990428	miRNA transport	HNRNPA2B1	IDA		Human	PMID:24356509
Biological Process	GO:0006406	mRNA export from nucleus	HNRNPA2B1	IDA		Human	PMID:10567417
Biological Process	GO:0006406	mRNA export from nucleus	Hnrnpa2b1	IDA		Rat	PMID:10567417\|RGD:9685424
Biological Process	GO:0006406	mRNA export from nucleus	Hnrnpa2b1	IDA		Rat	PMID:9578590\|RGD:9685477
Biological Process	GO:0006397	mRNA processing	HNRNPA2B1	IDA		Human	PMID:2557628
Biological Process	GO:0000398	mRNA splicing, via spliceosome	HNRNPA2B1	IMP		Human	PMID:26321680
Biological Process	GO:0048025	negative regulation of mRNA splicing, via spliceosome	Hnrnpa2b1	IMP		Mouse	PMID:18480465
Biological Process	GO:0048025	negative regulation of mRNA splicing, via spliceosome	Hnrnpa2b1	IDA		Mouse	PMID:18480465
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Hnrnpa2b1	IGI	MGI:MGI:2443180	Mouse	PMID:23907535
Biological Process	GO:0048709	oligodendrocyte differentiation	Hnrnpa2b1	IEP		Rat	PMID:14991837\|RGD:9685479
Biological Process	GO:1905663	positive regulation of telomerase RNA reverse transcriptase activity	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Biological Process	GO:1904358	positive regulation of telomere maintenance via telomere lengthening	Hnrnpa2b1	IDA		Rat	PMID:23184978\|RGD:11567256
Biological Process	GO:0031053	primary miRNA processing	HNRNPA2B1	IDA		Human	PMID:26321680
Biological Process	GO:0051385	response to mineralocorticoid	Hnrnpa2b1	IEP		Rat	PMID:23139218\|RGD:9685409
Biological Process	GO:0050658	RNA transport	HNRNPA2B1	IDA		Human	PMID:17004321
Biological Process	GO:0050658	RNA transport	Hnrnpa2b1	IMP		Rat	PMID:14523087\|RGD:9685480
Biological Process	GO:0016233	telomere capping	Hnrnpa2b1	IDA		Rat	PMID:15659580\|RGD:10680046

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/19/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.