Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HNRNPR
  • Mouse genes Hnrnpr
  • Rat genes Hnrnpr
  • Zfish genes hnrnpr
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hnrnpr

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Hnrnpr	IDA		Rat	PMID:15798208|RGD:9854643
Molecular Function	GO:0003729	mRNA binding	hnrnpr	IDA		Zfish	PMID:20167579
Molecular Function	GO:0005515	protein binding	HNRNPR	IPI	UniProtKB:Q99873	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	HNRNPR	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	HNRNPR	IPI	UniProtKB:Q5VWX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPR	IPI	UniProtKB:Q99873	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HNRNPR	IPI	UniProtKB:Q99873	Human	PMID:31515488
Molecular Function	GO:0003723	RNA binding	HNRNPR	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	HNRNPR	HDA		Human	PMID:22681889
Cellular Component	GO:0043679	axon terminus	Hnrnpr	IDA		Rat	PMID:19015982|RGD:9854644
Cellular Component	GO:0071013	catalytic step 2 spliceosome	HNRNPR	IDA		Human	PMID:11991638
Cellular Component	GO:0005737	cytoplasm	Hnrnpr	IDA		Rat	PMID:14623865|RGD:9999178
Cellular Component	GO:0005737	cytoplasm	Hnrnpr	IDA		Rat	PMID:15798208|RGD:9854643
Cellular Component	GO:0030425	dendrite	Hnrnpr	IDA		Rat	PMID:19015982|RGD:9854644
Cellular Component	GO:0030426	growth cone	Hnrnpr	IDA		Rat	PMID:14623865|RGD:9999178
Cellular Component	GO:0005654	nucleoplasm	HNRNPR	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HNRNPR	IDA		Human	PMID:9421497
Cellular Component	GO:0005634	nucleus	HNRNPR	IDA		Human	PMID:31079900
Cellular Component	GO:0005634	nucleus	Hnrnpr	IDA		Mouse	PMID:10734137
Cellular Component	GO:0005634	nucleus	Hnrnpr	IDA		Rat	PMID:15798208|RGD:9854643
Cellular Component	GO:1990904	ribonucleoprotein complex	HNRNPR	IDA		Human	PMID:17289661
Biological Process	GO:0048846	axon extension involved in axon guidance	hnrnpr	IMP	ZFIN:ZDB-MRPHLNO-100618-5	Zfish	PMID:20167579
Biological Process	GO:0007623	circadian rhythm	Hnrnpr	IEP		Rat	PMID:15798208|RGD:9854643
Biological Process	GO:0061157	mRNA destabilization	Hnrnpr	IMP		Rat	PMID:15798208|RGD:9854643
Biological Process	GO:0043086	negative regulation of catalytic activity	Hnrnpr	IMP		Rat	PMID:15798208|RGD:9854643
Biological Process	GO:0061014	positive regulation of mRNA catabolic process	Hnrnpr	IMP		Rat	PMID:15798208|RGD:9854643

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern