Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HORMAD1
  • Mouse genes Hormad1
  • Rat genes Hormad1
  • Zfish genes hormad1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hormad1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	HORMAD1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HORMAD1	IPI	UniProtKB:Q9HB07	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HORMAD1	IPI	UniProtKB:Q9UHG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Hormad1	IPI	UniProtKB:Q5SQP1	Mouse	MGI:MGI:5319701|PMID:22549958
Molecular Function	GO:0005515	protein binding	Hormad1	IPI	UniProtKB:Q6PDM4	Mouse	MGI:MGI:5822944|PMID:27723721
Cellular Component	GO:0005694	chromosome	Hormad1	IDA		Mouse	MGI:MGI:6478065|PMID:30746471
Cellular Component	GO:0005694	chromosome	Hormad1	IDA		Mouse	MGI:MGI:5319701|PMID:22549958
Cellular Component	GO:0005694	chromosome	Hormad1	IDA		Mouse	MGI:MGI:4461385|PMID:19851446
Cellular Component	GO:0005694	chromosome	Hormad1	IDA		Mouse	MGI:MGI:4421127|PMID:19686734
Cellular Component	GO:0005694	chromosome	Hormad1	IDA		Mouse	MGI:MGI:6272683|PMID:30272023
Cellular Component	GO:0000794	condensed nuclear chromosome	Hormad1	IDA		Mouse	PMID:22164254
Cellular Component	GO:0000794	condensed nuclear chromosome	Hormad1	IDA		Mouse	PMID:22530760
Cellular Component	GO:0005737	cytoplasm	Hormad1	IDA		Mouse	MGI:MGI:4421127|PMID:19686734
Cellular Component	GO:0005634	nucleus	HORMAD1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	Hormad1	IDA		Mouse	MGI:MGI:4421127|PMID:19686734
Cellular Component	GO:0005634	nucleus	Hormad1	IDA		Mouse	MGI:MGI:4461385|PMID:19851446
Cellular Component	GO:0000795	synaptonemal complex	Hormad1	IDA		Mouse	PMID:22854038
Biological Process	GO:0001824	blastocyst development	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	Hormad1	IMP	MGI:MGI:5587823	Mouse	PMID:22530760
Biological Process	GO:0051321	meiotic cell cycle	Hormad1	IEP		Mouse	MGI:MGI:4461385|PMID:19851446
Biological Process	GO:0051321	meiotic cell cycle	Hormad1	IEP		Mouse	MGI:MGI:4421127|PMID:19686734
Biological Process	GO:0042138	meiotic DNA double-strand break formation	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0042138	meiotic DNA double-strand break formation	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0051598	meiotic recombination checkpoint signaling	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0051598	meiotic recombination checkpoint signaling	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0051598	meiotic recombination checkpoint signaling	Hormad1	IMP	MGI:MGI:5587823	Mouse	PMID:22530760
Biological Process	GO:0051177	meiotic sister chromatid cohesion	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0051177	meiotic sister chromatid cohesion	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0048477	oogenesis	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0048477	oogenesis	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0060629	regulation of homologous chromosome segregation	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0060629	regulation of homologous chromosome segregation	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0007283	spermatogenesis	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856
Biological Process	GO:0007283	spermatogenesis	Hormad1	IMP		Mouse	MGI:MGI:4868505|PMID:21079677
Biological Process	GO:0007130	synaptonemal complex assembly	Hormad1	IMP		Mouse	MGI:MGI:5009722|PMID:21478856

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern