Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HOXB7
  • Mouse genes Hoxb7
  • Rat genes Hoxb7
  • Zfish genes hoxb7a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxb7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Hoxb7	IDA		Mouse	PMID:1353046
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	HOXB7	IDA		Human	PMID:8756643
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:P13010	Human	PMID:17308091
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:P78527	Human	PMID:17308091
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:P49761	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:P49761	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	HOXB7	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	HOXB7	IDA		Human	PMID:8756643
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	HOXB7	IDA		Human	PMID:28473536
Cellular Component	GO:0005829	cytosol	HOXB7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	HOXB7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HOXB7	IDA		Human	GO_REF:0000052
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96179	Mouse	PMID:9784603
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96187	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96183	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IMP	MGI:MGI:2150401	Mouse	PMID:9784603
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb7	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0048568	embryonic organ development	HOXB7	IEP		Human	PMID:2885844
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96183	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96179	Mouse	PMID:9784603
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96187	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IMP	MGI:MGI:2150401	Mouse	PMID:9784603
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb7	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0030099	myeloid cell differentiation	Hoxb7	IMP		Mouse	PMID:1354076
Biological Process	GO:0090190	positive regulation of branching involved in ureteric bud morphogenesis	Hoxb7	IMP		Mouse	MGI:MGI:3833510|PMID:17881463
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	HOXB7	IDA		Human	PMID:8756643

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern