Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HOXC5
  • Mouse genes Hoxc5
  • Rat genes Hoxc5
  • Zfish genes hoxc5a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxc5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:P40424	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:P40425	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:P56545-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:P62487	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:P78424	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q05516	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q92997	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q969G2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q9BYU1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXC5	IPI	UniProtKB:Q9UBR4-2	Human	PMID:32296183
Cellular Component	GO:0030054	cell junction	HOXC5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HOXC5	IDA		Human	GO_REF:0000052
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxc5	IGI	MGI:MGI:96177	Mouse	PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxc5	IGI	MGI:MGI:96186	Mouse	PMID:17626057
Biological Process	GO:0048706	embryonic skeletal system development	Hoxc5	IGI	MGI:MGI:96186	Mouse	PMID:17626057
Biological Process	GO:0048706	embryonic skeletal system development	Hoxc5	IGI	MGI:MGI:96177	Mouse	PMID:17626057

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern