Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IDH3B
  • Mouse genes Idh3b
  • Rat genes Idh3b
  • Zfish genes idh3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Idh3b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004449	isocitrate dehydrogenase (NAD+) activity	Idh3b	IDA		Rat	PMID:938457|RGD:2306828
Cellular Component	GO:0005962	mitochondrial isocitrate dehydrogenase complex (NAD+)	IDH3B	IPI		Human	PMID:14555658
Cellular Component	GO:0005962	mitochondrial isocitrate dehydrogenase complex (NAD+)	Idh3b	IMP	MGI:MGI:5904256	Mouse	PMID:35985423
Cellular Component	GO:0005739	mitochondrion	IDH3B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Idh3b	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Idh3b	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005634	nucleus	IDH3B	HDA		Human	PMID:21630459
Biological Process	GO:0006103	2-oxoglutarate metabolic process	Idh3b	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0006102	isocitrate metabolic process	Idh3b	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0006734	NADH metabolic process	Idh3b	IDA		Rat	PMID:938457|RGD:2306828
Biological Process	GO:0006099	tricarboxylic acid cycle	IDH3B	IDA		Human	PMID:14555658
Biological Process	GO:0006099	tricarboxylic acid cycle	Idh3b	IDA		Rat	PMID:938457|RGD:2306828

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern