Comparative GO Graph (mouse, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Iigp1
  • Rat genes Ifgga2l1,RGD1309362
  • Zfish genes irge4,irgf1,irgf3,si:ch73-171o20.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Iigp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019003	GDP binding	Iigp1	IDA		Mouse	PMID:12732635
Molecular Function	GO:0005525	GTP binding	Iigp1	IDA		Mouse	PMID:12732635
Molecular Function	GO:0003924	GTPase activity	Iigp1	IDA		Mouse	PMID:12732635
Molecular Function	GO:0042802	identical protein binding	Iigp1	IPI	UniProtKB:Q9QZ85	Mouse	MGI:MGI:5918879|PMID:21203588
Molecular Function	GO:0042802	identical protein binding	Iigp1	IDA		Mouse	PMID:12732635
Molecular Function	GO:0005515	protein binding	Iigp1	IPI	UniProtKB:A1E140	Mouse	MGI:MGI:5918879|PMID:21203588
Cellular Component	GO:0005737	cytoplasm	Iigp1	IDA		Mouse	MGI:MGI:3790325|PMID:16304607
Cellular Component	GO:0005737	cytoplasm	Iigp1	IDA		Mouse	MGI:MGI:3822947|PMID:18784077
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Iigp1	IDA		Mouse	MGI:MGI:3054272|PMID:15294976
Cellular Component	GO:0020005	symbiont-containing vacuole membrane	Iigp1	IDA		Mouse	MGI:MGI:4887557|PMID:18772884
Biological Process	GO:0035458	cellular response to interferon-beta	Iigp1	IDA		Mouse	PMID:19158679
Biological Process	GO:0050829	defense response to Gram-negative bacterium	Iigp1	IDA		Mouse	MGI:MGI:3836363|PMID:19242543
Biological Process	GO:0042832	defense response to protozoan	Iigp1	IDA		Mouse	MGI:MGI:3790325|PMID:16304607
Biological Process	GO:0010506	regulation of autophagy	Iigp1	IMP		Mouse	MGI:MGI:3836363|PMID:19242543
Biological Process	GO:0009617	response to bacterium	Iigp1	IEP		Mouse	PMID:23012479

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern