Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IMMT
  • Mouse genes Immt
  • Rat genes Immt
  • Zfish genes immt
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Immt

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:O60341	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9NRI5	Human	PMID:17043677
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:O60313	Human	PMID:21081504
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9NX63	Human	PMID:21081504
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q5VU43	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9BRQ6	Human	PMID:22228767
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q5TGZ0	Human	PMID:25764979
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q6UXV4	Human	PMID:25764979
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9BUR5	Human	PMID:25764979
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q96AG3	Human	PMID:26168012
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q8WYQ3	Human	PMID:26666268
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:P08559	Human	PMID:29128334
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q5VU43	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:P54252	Human	PMID:31379806
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9NRI5	Human	PMID:31413325
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:Q9NVT9	Human	PMID:31644573
Molecular Function	GO:0005515	protein binding	IMMT	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Immt	IPI	UniProtKB:Q80X86	Mouse	MGI:MGI:6507113|PMID:33536340
Molecular Function	GO:0005515	protein binding	Immt	IPI	UniProtKB:Q9CRB9	Mouse	MGI:MGI:5009773|PMID:21081504
Molecular Function	GO:0003723	RNA binding	IMMT	HDA		Human	PMID:22658674
Cellular Component	GO:0016020	membrane	IMMT	HDA		Human	PMID:19946888
Cellular Component	GO:0140275	MIB complex	IMMT	HDA		Human	PMID:26477565
Cellular Component	GO:0061617	MICOS complex	IMMT	IDA		Human	PMID:25781180
Cellular Component	GO:0061617	MICOS complex	IMMT	IDA		Human	PMID:25997101
Cellular Component	GO:0061617	MICOS complex	IMMT	HDA		Human	PMID:26477565
Cellular Component	GO:0005743	mitochondrial inner membrane	IMMT	IDA		Human	PMID:25997101
Cellular Component	GO:0005743	mitochondrial inner membrane	IMMT	IDA		Human	PMID:9168817
Cellular Component	GO:0005758	mitochondrial intermembrane space	Immt	IDA		Mouse	PMID:28376086
Cellular Component	GO:0005739	mitochondrion	IMMT	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	IMMT	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	IMMT	IDA		Human	PMID:25781180
Cellular Component	GO:0005739	mitochondrion	IMMT	IDA		Human	PMID:25997101
Cellular Component	GO:0005739	mitochondrion	Immt	IMP		Mouse	MGI:MGI:4837265|PMID:20880836
Cellular Component	GO:0005739	mitochondrion	Immt	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Immt	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Immt	IDA		Mouse	PMID:20880836
Cellular Component	GO:0005739	mitochondrion	Immt	IDA		Rat	PMID:17203945|RGD:1627621
Cellular Component	GO:0005739	mitochondrion	Immt	IDA		Rat	PMID:20533907|RGD:7327223
Cellular Component	GO:0043209	myelin sheath	Immt	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0001401	SAM complex	IMMT	HDA		Human	PMID:26477565
Biological Process	GO:0042407	cristae formation	IMMT	IMP		Human	PMID:25781180
Biological Process	GO:0051560	mitochondrial calcium ion homeostasis	Immt	IMP		Mouse	PMID:20880836
Biological Process	GO:0070050	neuron cellular homeostasis	Immt	IMP		Mouse	PMID:20880836
Biological Process	GO:0009409	response to cold	Immt	IEP		Rat	PMID:17203945|RGD:1627621

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern