Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes INA
  • Mouse genes Ina
  • Rat genes Ina
  • Zfish genes inaa,inab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ina

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	INA	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	INA	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Ina	IPI	PR:P10126	Mouse	PMID:21689717
Molecular Function	GO:0005515	protein binding	Ina	IPI	UniProtKB:Q9EPI6	Rat	PMID:23452857|RGD:8554744
Molecular Function	GO:0044877	protein-containing complex binding	Ina	IDA		Rat	PMID:9388258|RGD:9743943
Molecular Function	GO:0099184	structural constituent of postsynaptic intermediate filament cytoskeleton	Ina	IMP		Mouse	PMID:25869803
Molecular Function	GO:0099184	structural constituent of postsynaptic intermediate filament cytoskeleton	Ina	IDA		Mouse	PMID:25869803
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	INA	IDA		Human	PMID:15121898
Cellular Component	GO:0005615	extracellular space	INA	HDA		Human	PMID:22664934
Cellular Component	GO:0098978	glutamatergic synapse	Ina	IDA		Rat	PMID:9310396|RGD:13702147
Cellular Component	GO:0005882	intermediate filament	inaa	IDA		Zfish	PMID:27159642
Cellular Component	GO:0043209	myelin sheath	Ina	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0005883	neurofilament	Ina	IDA		Mouse	PMID:10221457
Cellular Component	GO:0098794	postsynapse	Ina	IDA		Mouse	PMID:25869803
Cellular Component	GO:0098794	postsynapse	Ina	IDA		Rat	PMID:9310396|RGD:13702147
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Ina	IDA		Rat	PMID:9310396|RGD:13702147
Cellular Component	GO:0099160	postsynaptic intermediate filament cytoskeleton	Ina	IDA		Rat	PMID:9310396|RGD:13702147
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Ina	IDA		Mouse	PMID:25869803
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Ina	IMP		Mouse	PMID:25869803
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Ina	IEP		Mouse	PMID:20439489
Biological Process	GO:0045104	intermediate filament cytoskeleton organization	Ina	IMP		Mouse	PMID:14561875
Biological Process	GO:0060052	neurofilament cytoskeleton organization	Ina	IGI	MGI:MGI:97313	Mouse	PMID:10350642
Biological Process	GO:0048812	neuron projection morphogenesis	inab	IMP	ZFIN:ZDB-MRPHLNO-140602-2,ZFIN:ZDB-MRPHLNO-140602-3	Zfish	PMID:24533123
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	Ina	IMP		Mouse	PMID:25869803
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	Ina	IDA		Mouse	PMID:25869803
Biological Process	GO:0021762	substantia nigra development	INA	HEP		Human	PMID:22926577
Biological Process	GO:0042246	tissue regeneration	Ina	IEP		Rat	PMID:12077192|RGD:628341

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern