Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes INO80D
  • Mouse genes Ino80d
  • Rat genes Ino80d
  • Zfish genes ino80db
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ino80d

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0031011	Ino80 complex	INO80D	IDA		Human	PMID:21303910
Biological Process	GO:0006338	chromatin remodeling	INO80D	IDA		Human	PMID:21303910
Biological Process	GO:0045739	positive regulation of DNA repair	Ino80d	IDA		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	INO80D	IMP		Human	PMID:27641337
Biological Process	GO:1904507	positive regulation of telomere maintenance in response to DNA damage	Ino80d	IMP		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0051726	regulation of cell cycle	INO80D	IMP		Human	PMID:26340092
Biological Process	GO:0033044	regulation of chromosome organization	INO80D	IMP		Human	PMID:26340092
Biological Process	GO:0006282	regulation of DNA repair	Ino80d	IDA		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0006275	regulation of DNA replication	INO80D	IMP		Human	PMID:25016522
Biological Process	GO:0060382	regulation of DNA strand elongation	INO80D	IMP		Human	PMID:25016522
Biological Process	GO:0045995	regulation of embryonic development	Ino80d	IMP		Mouse	MGI:MGI:5638510|PMID:23979016
Biological Process	GO:0000723	telomere maintenance	Ino80d	IMP		Mouse	MGI:MGI:5638510|PMID:23979016

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern