Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes IQCE
  • Mouse genes Iqce
  • Rat genes Iqce
  • Zfish genes iqce
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Iqce

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:P25788	Human	PMID:24722188
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:B4DJ51	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:P25788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:Q9BRL5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:P52597	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:Q5W5X9-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	IQCE	IPI	UniProtKB:Q9Y4H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Iqce	IPI	UniProtKB:P57680|UniProtKB:Q8K1G2|UniProtKB:Q8VDY4	Mouse	MGI:MGI:5908325|PMID:24582806
Cellular Component	GO:0060170	ciliary membrane	Iqce	IDA		Mouse	MGI:MGI:5908325|PMID:24582806
Cellular Component	GO:0019898	extrinsic component of membrane	Iqce	IDA		Mouse	MGI:MGI:5908325|PMID:24582806
Cellular Component	GO:0005739	mitochondrion	Iqce	HDA		Mouse	PMID:18614015
Cellular Component	GO:0098797	plasma membrane protein complex	Iqce	IDA		Mouse	MGI:MGI:5908325|PMID:24582806
Biological Process	GO:0035108	limb morphogenesis	IQCE	IMP		Human	PMID:28488682
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Iqce	IMP		Mouse	MGI:MGI:5908325|PMID:24582806

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern