Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JADE1
  • Mouse genes Jade1
  • Rat genes Jade1
  • Zfish genes jade1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jade1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0036408	histone H3K14 acetyltransferase activity	JADE1	IDA		Human	PMID:16387653
Molecular Function	GO:0043997	histone H4K12 acetyltransferase activity	JADE1	IDA		Human	PMID:16387653
Molecular Function	GO:0043995	histone H4K5 acetyltransferase activity	JADE1	IDA		Human	PMID:16387653
Molecular Function	GO:0043996	histone H4K8 acetyltransferase activity	JADE1	IDA		Human	PMID:16387653
Molecular Function	GO:0005515	protein binding	JADE1	IPI	UniProtKB:P40337	Human	PMID:12169691
Molecular Function	GO:0005515	protein binding	JADE1	IPI	UniProtKB:O75161	Human	PMID:22654112
Molecular Function	GO:0005515	protein binding	JADE1	IPI	UniProtKB:O95251	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	JADE1	IPI	UniProtKB:Q9BW85	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	JADE1	IPI	UniProtKB:O95251	Human	PMID:28514442
Molecular Function	GO:0003713	transcription coactivator activity	JADE1	IDA		Human	PMID:23001567
Cellular Component	GO:0005813	centrosome	JADE1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0036064	ciliary basal body	JADE1	IDA		Human	PMID:22654112
Cellular Component	GO:0005737	cytoplasm	JADE1	IDA		Human	PMID:12169691
Cellular Component	GO:0000123	histone acetyltransferase complex	JADE1	IDA		Human	PMID:16387653
Cellular Component	GO:0000123	histone acetyltransferase complex	JADE1	IPI		Human	PMID:16387653
Cellular Component	GO:0016607	nuclear speck	JADE1	IDA		Human	PMID:12169691
Cellular Component	GO:0005654	nucleoplasm	JADE1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	JADE1	IDA		Human	PMID:16387653
Cellular Component	GO:0005634	nucleus	JADE1	IDA		Human	PMID:12169691
Cellular Component	GO:0005886	plasma membrane	JADE1	IDA		Human	PMID:23001567
Biological Process	GO:0043983	histone H4-K12 acetylation	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0043981	histone H4-K5 acetylation	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0043982	histone H4-K8 acetylation	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0016570	histone modification	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	JADE1	IDA		Human	PMID:22654112
Biological Process	GO:2000134	negative regulation of G1/S transition of mitotic cell cycle	JADE1	IDA		Human	PMID:23001567
Biological Process	GO:0060828	regulation of canonical Wnt signaling pathway	jade1	IGI	ZFIN:ZDB-MRPHLNO-110808-1,ZFIN:ZDB-MRPHLNO-120809-6	Zfish	PMID:22654112
Biological Process	GO:0051726	regulation of cell cycle	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0001558	regulation of cell growth	JADE1	IDA		Human	PMID:22144582
Biological Process	GO:2000278	regulation of DNA biosynthetic process	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0006275	regulation of DNA replication	JADE1	IDA		Human	PMID:16387653
Biological Process	GO:0006355	regulation of DNA-templated transcription	JADE1	IDA		Human	PMID:22144582

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern