Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Jarid2

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes JARID2
- Mouse genes Jarid2
- Rat genes Jarid2
- Zfish genes jarid2a,jarid2b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jarid2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Jarid2	IDA		Mouse	MGI:MGI:4436818\|PMID:20064376
Molecular Function	GO:0003682	chromatin binding	Jarid2	IDA		Mouse	MGI:MGI:4431292\|PMID:20064375
Molecular Function	GO:0003677	DNA binding	Jarid2	IDA		Mouse	PMID:12890668
Molecular Function	GO:0046976	histone H3K27 methyltransferase activity	Jarid2	IDA		Mouse	MGI:MGI:4436818\|PMID:20064376
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:P42582\|UniProtKB:Q08369	Mouse	MGI:MGI:3525051\|PMID:15542826
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:P70351	Mouse	MGI:MGI:4436818\|PMID:20064376
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q61188\|UniProtKB:Q80U70\|UniProtKB:Q921E6	Mouse	MGI:MGI:4436818\|PMID:20064376
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:P01108\|UniProtKB:P48432\|UniProtKB:Q60793	Mouse	MGI:MGI:5887185\|PMID:26523946
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q5SXI5	Mouse	MGI:MGI:3715398\|PMID:17521633
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q61188\|UniProtKB:Q80U70\|UniProtKB:Q921E6	Mouse	MGI:MGI:4431292\|PMID:20064375
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q80U70	Mouse	MGI:MGI:4431292\|PMID:20064375
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q61188\|UniProtKB:Q80U70	Mouse	MGI:MGI:5286758\|PMID:21811233
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q5DW34\|UniProtKB:Q9Z148	Mouse	MGI:MGI:4441247\|PMID:19010785
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	UniProtKB:Q80U70\|UniProtKB:Q921E6	Mouse	MGI:MGI:4441020\|PMID:20075857
Molecular Function	GO:0005515	protein binding	Jarid2	IPI	PR:P13405	Mouse	PMID:15870077
Molecular Function	GO:0008134	transcription factor binding	Jarid2	IPI	UniProtKB:E9Q3T6\|UniProtKB:Q61539\|UniProtKB:Q8BX22	Mouse	MGI:MGI:5887185\|PMID:26523946
Molecular Function	GO:0043130	ubiquitin binding	Jarid2	IMP	MGI:MGI:5888989	Mouse	PMID:27892467
Molecular Function	GO:0061649	ubiquitin modification-dependent histone binding	Jarid2	IMP	MGI:MGI:5888989	Mouse	PMID:27892467
Cellular Component	GO:0035098	ESC/E(Z) complex	Jarid2	IDA		Mouse	MGI:MGI:4431292\|PMID:20064375
Cellular Component	GO:0035098	ESC/E(Z) complex	Jarid2	IDA		Mouse	MGI:MGI:4436818\|PMID:20064376
Cellular Component	GO:0035098	ESC/E(Z) complex	Jarid2	IDA		Mouse	PMID:31451685
Cellular Component	GO:0035097	histone methyltransferase complex	Jarid2	IDA		Mouse	MGI:MGI:4441247\|PMID:19010785
Cellular Component	GO:0005739	mitochondrion	JARID2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	JARID2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	JARID2	IDA		Human	PMID:20075857
Cellular Component	GO:0005634	nucleus	Jarid2	IDA		Mouse	MGI:MGI:4431292\|PMID:20064375
Cellular Component	GO:0005634	nucleus	Jarid2	IDA		Mouse	PMID:12890668
Biological Process	GO:0060038	cardiac muscle cell proliferation	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:15870077
Biological Process	GO:0008283	cell population proliferation	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:15870077
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Jarid2	IEP		Mouse	PMID:20439489
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Jarid2	IMP	MGI:MGI:5888989	Mouse	PMID:27892467
Biological Process	GO:0140718	facultative heterochromatin formation	Jarid2	IDA		Mouse	MGI:MGI:4441247\|PMID:19010785
Biological Process	GO:0140718	facultative heterochromatin formation	Jarid2	IDA		Mouse	MGI:MGI:4436818\|PMID:20064376
Biological Process	GO:0140718	facultative heterochromatin formation	Jarid2	IDA		Mouse	MGI:MGI:4431292\|PMID:20064375
Biological Process	GO:0001889	liver development	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:9376320
Biological Process	GO:0060044	negative regulation of cardiac muscle cell proliferation	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:15870077
Biological Process	GO:0060044	negative regulation of cardiac muscle cell proliferation	Jarid2	IDA		Rat	PMID:26298346\|RGD:11522645
Biological Process	GO:0060044	negative regulation of cardiac muscle cell proliferation	Jarid2	IMP		Rat	PMID:26298346\|RGD:11522645
Biological Process	GO:0010614	negative regulation of cardiac muscle hypertrophy	Jarid2	IGI	RNAcentral:URS0000021B51_10116	Rat	PMID:24657879\|RGD:11344938
Biological Process	GO:0010614	negative regulation of cardiac muscle hypertrophy	Jarid2	IMP		Rat	PMID:24657879\|RGD:11344938
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Jarid2	IDA		Mouse	PMID:12890668
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Jarid2	IDA		Mouse	MGI:MGI:2678857\|PMID:12890668
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Jarid2	IGI	MGI:MGI:97874	Mouse	PMID:15870077
Biological Process	GO:1902682	protein localization to pericentric heterochromatin	Jarid2	IMP	MGI:MGI:5888989	Mouse	PMID:27892467
Biological Process	GO:0042127	regulation of cell population proliferation	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:11301191
Biological Process	GO:0048536	spleen development	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:9376320
Biological Process	GO:0048863	stem cell differentiation	Jarid2	IMP		Mouse	MGI:MGI:4441020\|PMID:20075857
Biological Process	GO:0048863	stem cell differentiation	Jarid2	IMP		Mouse	MGI:MGI:4436818\|PMID:20064376
Biological Process	GO:0048863	stem cell differentiation	Jarid2	IMP		Mouse	MGI:MGI:4431292\|PMID:20064375
Biological Process	GO:0048538	thymus development	Jarid2	IMP	MGI:MGI:1856923	Mouse	PMID:9376320

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 10/22/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.