Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JDP2
  • Mouse genes Jdp2
  • Rat genes Jdp2
  • Zfish genes jdp2a,jdp2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jdp2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035497	cAMP response element binding	Jdp2	IDA		Mouse	PMID:11231009
Molecular Function	GO:0003682	chromatin binding	Jdp2	IDA		Mouse	PMID:17464331
Molecular Function	GO:0003677	DNA binding	Jdp2	IDA		Mouse	PMID:11231009
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Jdp2	IDA		Rat	PMID:9154808|RGD:633162
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	JDP2	IDA		Human	PMID:18671972
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Jdp2	IDA		Mouse	MGI:MGI:1930318|PMID:11231009
Molecular Function	GO:0003690	double-stranded DNA binding	Jdp2	IDA		Rat	PMID:9154808|RGD:633162
Molecular Function	GO:0140713	histone chaperone activity	Jdp2	IGI	MGI:MGI:1343091	Mouse	PMID:17464331
Molecular Function	GO:0042826	histone deacetylase binding	Jdp2	IPI	PR:O88895	Mouse	PMID:17464331
Molecular Function	GO:0043522	leucine zipper domain binding	Jdp2	IPI	UniProtKB:P16951	Mouse	PMID:11231009
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:P17275	Human	PMID:18671972
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:Q8IU81	Human	PMID:18671972
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:P17275	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:P18848	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:P35638	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JDP2	IPI	UniProtKB:Q02930-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Jdp2	IPI	PR:P97875	Mouse	PMID:11231009
Molecular Function	GO:0005515	protein binding	Jdp2	IPI	PR:P16951	Mouse	PMID:11231009
Molecular Function	GO:0046982	protein heterodimerization activity	Jdp2	IPI	UniProtKB:P16951	Mouse	PMID:11231009
Molecular Function	GO:0042803	protein homodimerization activity	Jdp2	IPI	UniProtKB:P97875	Mouse	PMID:11231009
Molecular Function	GO:0044877	protein-containing complex binding	Jdp2	IDA		Rat	PMID:9154808|RGD:633162
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Jdp2	IDA		Mouse	MGI:MGI:1930318|PMID:11231009
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	JDP2	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	JDP2	EXP		Human	PMID:11231009
Cellular Component	GO:0005634	nucleus	Jdp2	IDA		Mouse	PMID:17464331
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	JDP2	EXP		Human	PMID:11231009
Biological Process	GO:0006338	chromatin remodeling	Jdp2	IGI	MGI:MGI:1343091	Mouse	PMID:17464331
Biological Process	GO:0045444	fat cell differentiation	Jdp2	IDA		Mouse	PMID:17464331
Biological Process	GO:0045599	negative regulation of fat cell differentiation	Jdp2	IDA		Mouse	PMID:17464331
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	JDP2	EXP		Human	PMID:11231009
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	JDP2	IDA		Human	PMID:18671972
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Jdp2	IDA		Mouse	PMID:11231009
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Jdp2	IDA		Mouse	PMID:17464331
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Jdp2	IDA		Rat	PMID:9154808|RGD:633162
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Jdp2	IDA		Mouse	PMID:11231009

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern