Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JMJD8
  • Mouse genes Jmjd8
  • Rat genes Jmjd8
  • Zfish genes jmjd8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jmjd8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	JMJD8	IPI	UniProtKB:P14618	Human	PMID:27199445
Cellular Component	GO:0005737	cytoplasm	JMJD8	IDA		Human	PMID:27199445
Cellular Component	GO:0005783	endoplasmic reticulum	JMJD8	IDA		Human	PMID:29133832
Cellular Component	GO:0005788	endoplasmic reticulum lumen	JMJD8	IDA		Human	PMID:29133832
Cellular Component	GO:0005634	nucleus	JMJD8	IDA		Human	PMID:29133832
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	JMJD8	IMP		Human	PMID:27671354
Biological Process	GO:1903672	positive regulation of sprouting angiogenesis	JMJD8	IMP		Human	PMID:27199445
Biological Process	GO:0006110	regulation of glycolytic process	JMJD8	IMP		Human	PMID:27199445
Biological Process	GO:1903302	regulation of pyruvate kinase activity	JMJD8	IMP		Human	PMID:27199445

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern