Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes JPH1
  • Mouse genes Jph1
  • Rat genes Jph1
  • Zfish genes jph1a,jph1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Jph1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:A0PK00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:O15529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:O95214	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:P0DN84	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:P54849	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:P56851	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:P60201-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q6PI78	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q7RTY0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q9BUP3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	JPH1	IPI	UniProtKB:Q9UHE5	Human	PMID:32296183
Molecular Function	GO:0008307	structural constituent of muscle	Jph1	IMP		Mouse	MGI:MGI:3768019|PMID:12729900
Molecular Function	GO:0008307	structural constituent of muscle	Jph1	IMP	MGI:MGI:2183252	Mouse	PMID:12135771
Cellular Component	GO:0005783	endoplasmic reticulum	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0030314	junctional membrane complex	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0014701	junctional sarcoplasmic reticulum membrane	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0005654	nucleoplasm	JPH1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0016529	sarcoplasmic reticulum	Jph1	IDA		Mouse	MGI:MGI:1861885|PMID:10949023
Cellular Component	GO:0030018	Z disc	Jph1	IDA		Mouse	PMID:12135771
Biological Process	GO:0007517	muscle organ development	Jph1	IMP	MGI:MGI:2183252	Mouse	PMID:12135771

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern