Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes KATNB1
  • Mouse genes Katnb1
  • Rat genes Katnb1
  • Zfish genes katnb1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Katnb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0060590	ATPase regulator activity	KATNB1	IDA		Human	PMID:10751153
Molecular Function	GO:0070840	dynein complex binding	Katnb1	IDA		Mouse	PMID:16203747
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:Q08AD1	Human	PMID:24486153
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:Q9P1Y5	Human	PMID:24486153
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:O75449	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:O75449	Human	PMID:26929214
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:Q9BW62	Human	PMID:26929214
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:O75449	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	KATNB1	IPI	UniProtKB:P40337-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	UniProtKB:Q9WV86	Mouse	MGI:MGI:5905207|PMID:28436967
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	UniProtKB:Q9WV86	Mouse	MGI:MGI:5476424|PMID:22325007
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	PR:Q9WV86	Mouse	PMID:16203747
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	PR:P63005	Mouse	PMID:16203747
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	PR:Q9ERR1	Mouse	PMID:16203747
Molecular Function	GO:0005515	protein binding	Katnb1	IPI	RGD:1359249	Rat	PMID:17351128|RGD:2316494
Molecular Function	GO:0046982	protein heterodimerization activity	KATNB1	IPI	UniProtKB:O75449	Human	PMID:10751153
Cellular Component	GO:0030424	axon	Katnb1	IDA		Mouse	PMID:16203747
Cellular Component	GO:0030424	axon	Katnb1	IDA		Mouse	PMID:15944385
Cellular Component	GO:0030424	axon	Katnb1	IDA		Rat	PMID:15944385|RGD:2316489
Cellular Component	GO:0005813	centrosome	Katnb1	IDA		Mouse	PMID:16203747
Cellular Component	GO:0005737	cytoplasm	KATNB1	IDA		Human	PMID:10751153
Cellular Component	GO:0005737	cytoplasm	KATNB1	IDA		Human	PMID:26929214
Cellular Component	GO:0005829	cytosol	KATNB1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030426	growth cone	Katnb1	IDA		Rat	PMID:15944385|RGD:2316489
Cellular Component	GO:0008352	katanin complex	KATNB1	IPI		Human	PMID:26929214
Cellular Component	GO:0008352	katanin complex	KATNB1	IDA		Human	PMID:9568719
Cellular Component	GO:0016020	membrane	KATNB1	HDA		Human	PMID:19946888
Cellular Component	GO:0005874	microtubule	KATNB1	IDA		Human	PMID:26929214
Cellular Component	GO:0015630	microtubule cytoskeleton	KATNB1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030496	midbody	Katnb1	IDA		Rat	PMID:17351128|RGD:2316494
Cellular Component	GO:0043025	neuronal cell body	Katnb1	IDA		Rat	PMID:15944385|RGD:2316489
Cellular Component	GO:0005634	nucleus	KATNB1	HDA		Human	PMID:21630459
Cellular Component	GO:0005886	plasma membrane	KATNB1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005819	spindle	KATNB1	IDA		Human	PMID:26929214
Cellular Component	GO:0000922	spindle pole	KATNB1	IDA		Human	PMID:10751153
Cellular Component	GO:0000922	spindle pole	KATNB1	IDA		Human	PMID:26929214
Biological Process	GO:0007420	brain development	katnb1	IMP	ZFIN:ZDB-GENO-150311-4	Zfish	PMID:25521379
Biological Process	GO:0007420	brain development	katnb1	IMP	ZFIN:ZDB-GENO-150311-7	Zfish	PMID:25521379
Biological Process	GO:0051013	microtubule severing	Katnb1	IDA		Rat	PMID:15944385|RGD:2316489
Biological Process	GO:0030901	midbrain development	katnb1	IMP	ZFIN:ZDB-MRPHLNO-150325-2	Zfish	PMID:25521378
Biological Process	GO:0007026	negative regulation of microtubule depolymerization	KATNB1	IMP		Human	PMID:10751153
Biological Process	GO:0043065	positive regulation of apoptotic process	Katnb1	IMP		Rat	PMID:17351128|RGD:2316494
Biological Process	GO:0031117	positive regulation of microtubule depolymerization	KATNB1	IMP		Human	PMID:10751153
Biological Process	GO:0010976	positive regulation of neuron projection development	Katnb1	IDA		Rat	PMID:15944385|RGD:2316489

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern