Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes KCNN1
  • Mouse genes Kcnn1
  • Rat genes Kcnn1
  • Zfish genes kcnn1a,kcnn1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Kcnn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005516	calmodulin binding	Kcnn1	IDA		Mouse	PMID:11267657
Molecular Function	GO:0005242	inward rectifier potassium channel activity	KCNN1	IDA		Human	PMID:12382077
Molecular Function	GO:0044877	protein-containing complex binding	Kcnn1	IMP		Rat	PMID:14559917|RGD:1358336
Molecular Function	GO:0016286	small conductance calcium-activated potassium channel activity	KCNN1	IDA		Human	PMID:12382077
Molecular Function	GO:0016286	small conductance calcium-activated potassium channel activity	Kcnn1	IMP		Rat	PMID:14559917|RGD:1358336
Molecular Function	GO:0016286	small conductance calcium-activated potassium channel activity	Kcnn1	IMP		Rat	PMID:19969350|RGD:8693687
Cellular Component	GO:0005737	cytoplasm	Kcnn1	IDA		Mouse	PMID:16055520
Cellular Component	GO:0043025	neuronal cell body	Kcnn1	IDA		Rat	PMID:15680700|RGD:7205443
Cellular Component	GO:0005886	plasma membrane	Kcnn1	IDA		Mouse	PMID:16055520
Biological Process	GO:0071805	potassium ion transmembrane transport	KCNN1	IDA		Human	PMID:12382077

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern