Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LAMA3
  • Mouse genes Lama3
  • Rat genes Lama3
  • Zfish genes lama3,si:ch211-241e1.3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lama3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Lama3	IPI	RGD:621633	Rat	PMID:16608848|RGD:1600017
Cellular Component	GO:0005912	adherens junction	Lama3	IDA		Rat	PMID:16608848|RGD:1600017
Cellular Component	GO:0005604	basement membrane	Lama3	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005604	basement membrane	Lama3	IDA		Mouse	PMID:15895400
Cellular Component	GO:0005604	basement membrane	Lama3	IDA		Mouse	PMID:12051813
Cellular Component	GO:0005604	basement membrane	Lama3	IDA		Mouse	PMID:9264260
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMA3	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lama3	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lama3	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0005783	endoplasmic reticulum	LAMA3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070062	extracellular exosome	LAMA3	HDA		Human	PMID:23533145
Cellular Component	GO:0030056	hemidesmosome	Lama3	IDA		Rat	PMID:8923212|RGD:633107
Cellular Component	GO:0005608	laminin-3 complex	Lama3	IDA		Rat	PMID:8923212|RGD:633107
Cellular Component	GO:0005610	laminin-5 complex	Lama3	IDA		Mouse	PMID:9264260
Biological Process	GO:0098609	cell-cell adhesion	Lama3	IMP		Rat	PMID:16608848|RGD:1600017
Biological Process	GO:0035987	endodermal cell differentiation	LAMA3	IEP		Human	PMID:23154389
Biological Process	GO:0031581	hemidesmosome assembly	Lama3	IMP		Rat	PMID:8923212|RGD:633107

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern