Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Lamb1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes LAMB1
- Mouse genes Lamb1
- Rat genes Lamb1
- Zfish genes lamb1a,lamb1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lamb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	Lamb1	IPI	PR:P21836	Mouse	PMID:15474030
Molecular Function	GO:0005201	extracellular matrix structural constituent	LAMB1	IDA		Human	PMID:16289578
Molecular Function	GO:0043208	glycosphingolipid binding	Lamb1	IDA		Mouse	PMID:19118221
Molecular Function	GO:0005178	integrin binding	Lamb1	IMP		Mouse	PMID:9004048
Molecular Function	GO:0005515	protein binding	LAMB1	IPI	UniProtKB:C5MBE7	Human	PMID:26438063
Molecular Function	GO:0005515	protein binding	LAMB1	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LAMB1	IPI	UniProtKB:Q8TDT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LAMB1	IPI	UniProtKB:Q9UMX0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	UniProtKB:P09055	Mouse	MGI:MGI:6810807\|PMID:34427057
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	UniProtKB:P31696	Mouse	MGI:MGI:87530\|PMID:9151673
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	UniProtKB:P02468	Mouse	MGI:MGI:5508730\|PMID:21311558
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	UniProtKB:P17301	Mouse	MGI:MGI:4412469\|PMID:7639691
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	PR:P02468	Mouse	PMID:12743034
Molecular Function	GO:0005515	protein binding	Lamb1	IPI	PR:Q61001	Mouse	PMID:12743034
Cellular Component	GO:0005604	basement membrane	LAMB1	IDA		Human	PMID:14557481
Cellular Component	GO:0005604	basement membrane	LAMB1	IDA		Human	PMID:2099832
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	MGI:MGI:3776221\|PMID:16041630
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	MGI:MGI:4441265\|PMID:16631359
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	MGI:MGI:3610934\|PMID:12631063
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:1292752
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:15895400
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:15102706
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:9264260
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:12743034
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005604	basement membrane	Lamb1	IDA		Mouse	PMID:9396756
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMB1	HDA		Human	PMID:23658023
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMB1	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMB1	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMB1	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LAMB1	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lamb1	HDA		Mouse	MGI:MGI:6201834\|PMID:22159717
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lamb1	HDA		Mouse	MGI:MGI:6201853\|PMID:28071719
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lamb1	IDA		Rat	PMID:15928048\|RGD:1624263
Cellular Component	GO:0070062	extracellular exosome	LAMB1	HDA		Human	PMID:21362503
Cellular Component	GO:0031012	extracellular matrix	Lamb1	IDA		Mouse	PMID:16554364
Cellular Component	GO:0005615	extracellular space	LAMB1	IDA		Human	PMID:10964500
Cellular Component	GO:0043256	laminin complex	Lamb1	IDA		Mouse	PMID:8034675
Cellular Component	GO:0005606	laminin-1 complex	LAMB1	IPI	UniProtKB:P25391	Human	PMID:10964500
Cellular Component	GO:0005606	laminin-1 complex	LAMB1	IDA		Human	PMID:16289578
Cellular Component	GO:0005606	laminin-1 complex	Lamb1	IDA		Mouse	PMID:9264260
Cellular Component	GO:0043259	laminin-10 complex	LAMB1	IDA		Human	PMID:10964500
Cellular Component	GO:0043259	laminin-10 complex	LAMB1	IDA		Human	PMID:16289578
Cellular Component	GO:0043259	laminin-10 complex	Lamb1	IPI	PR:Q61001	Mouse	PMID:9299121
Cellular Component	GO:0043259	laminin-10 complex	Lamb1	IPI	PR:P02468	Mouse	PMID:9299121
Cellular Component	GO:0005607	laminin-2 complex	LAMB1	IDA		Human	PMID:16289578
Cellular Component	GO:0043257	laminin-8 complex	LAMB1	IDA		Human	PMID:16289578
Cellular Component	GO:0005634	nucleus	Lamb1	IDA		Mouse	PMID:10444590
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Lamb1	IDA		Mouse	MGI:MGI:3046598\|PMID:15207330
Biological Process	GO:0007420	brain development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-248	Zfish	PMID:9007234
Biological Process	GO:0007420	brain development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-248	Zfish	PMID:9007238
Biological Process	GO:0048854	brain morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-980202-272	Zfish	PMID:9007234
Biological Process	GO:0048854	brain morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-120228-75	Zfish	PMID:9007234
Biological Process	GO:0048854	brain morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-120228-76	Zfish	PMID:9007234
Biological Process	GO:0016477	cell migration	Lamb1	IMP		Mouse	PMID:9004048
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:17525225
Biological Process	GO:0003140	determination of left/right asymmetry in lateral mesoderm	lamb1a	IMP	ZFIN:ZDB-MRPHLNO-130816-8	Zfish	PMID:23757411
Biological Process	GO:0007566	embryo implantation	Lamb1	IMP	MGI:MGI:3048667	Mouse	PMID:15102706
Biological Process	GO:0035987	endodermal cell differentiation	LAMB1	IEP		Human	PMID:23154389
Biological Process	GO:0001654	eye development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-248	Zfish	PMID:9007234
Biological Process	GO:0048592	eye morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-120228-75	Zfish	PMID:9007234
Biological Process	GO:0048592	eye morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-980202-272	Zfish	PMID:9007234
Biological Process	GO:0048592	eye morphogenesis	lamb1a	IMP	ZFIN:ZDB-GENO-120228-76	Zfish	PMID:9007234
Biological Process	GO:0031101	fin regeneration	lamb1a	IMP	ZFIN:ZDB-GENO-160129-1	Zfish	PMID:26305099
Biological Process	GO:0055016	hypochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-248	Zfish	PMID:9007234
Biological Process	GO:0007517	muscle organ development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:20566368
Biological Process	GO:0007517	muscle organ development	lamb1a	IMP	ZFIN:ZDB-MRPHLNO-060916-1	Zfish	PMID:18833302
Biological Process	GO:0007517	muscle organ development	lamb1a	IMP	ZFIN:ZDB-GENO-080327-304	Zfish	PMID:18833302
Biological Process	GO:0007162	negative regulation of cell adhesion	Lamb1	IDA		Mouse	MGI:MGI:4412469\|PMID:7639691
Biological Process	GO:0031175	neuron projection development	LAMB1	IDA		Human	PMID:15894315
Biological Process	GO:0031175	neuron projection development	Lamb1	IDA		Mouse	PMID:19118221
Biological Process	GO:0021812	neuronal-glial interaction involved in cerebral cortex radial glia guided migration	LAMB1	IMP		Human	PMID:23472759
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-248	Zfish	PMID:9007234
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1271	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-914	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1270	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1273	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1274	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1272	Zfish	PMID:9007233
Biological Process	GO:0014028	notochord formation	lamb1a	IMP	ZFIN:ZDB-GENO-980202-272	Zfish	PMID:9007234
Biological Process	GO:0014028	notochord formation	lamb1a	IMP	ZFIN:ZDB-GENO-120228-76	Zfish	PMID:9007234
Biological Process	GO:0014028	notochord formation	lamb1a	IMP	ZFIN:ZDB-GENO-120228-75	Zfish	PMID:9007234
Biological Process	GO:0042476	odontogenesis	LAMB1	IDA		Human	PMID:15894315
Biological Process	GO:0007634	optokinetic behavior	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:17525225
Biological Process	GO:0030335	positive regulation of cell migration	LAMB1	IDA		Human	PMID:16289578
Biological Process	GO:1902017	regulation of cilium assembly	lamb1a	IMP	ZFIN:ZDB-GENO-110526-1	Zfish	PMID:23757411
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1273	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1270	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1274	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1271	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-914	Zfish	PMID:9007260
Biological Process	GO:0031290	retinal ganglion cell axon guidance	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1272	Zfish	PMID:9007260
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1186	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1271	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1272	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1273	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1274	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-914	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	lamb1a	IMP	ZFIN:ZDB-GENO-980202-1270	Zfish	PMID:9007233
Biological Process	GO:0034446	substrate adhesion-dependent cell spreading	LAMB1	IDA		Human	PMID:16236823

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.