Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LARP4
  • Mouse genes Larp4
  • Rat genes
  • Zfish genes larp4aa,larp4ab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Larp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	LARP4	IDA		Human	PMID:26001795
Molecular Function	GO:0008143	poly(A) binding	LARP4	IDA		Human	PMID:21098120
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:P11940	Human	PMID:21098120
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:P63244	Human	PMID:21098120
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:P06748	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:Q5S007	Human	PMID:29513927
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:P06748	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	LARP4	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0003723	RNA binding	LARP4	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	LARP4	HDA		Human	PMID:22681889
Cellular Component	GO:0010494	cytoplasmic stress granule	LARP4	IDA		Human	PMID:21098120
Cellular Component	GO:0005829	cytosol	LARP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	LARP4	IDA		Human	PMID:21098120
Cellular Component	GO:0016020	membrane	LARP4	HDA		Human	PMID:19946888
Biological Process	GO:0007010	cytoskeleton organization	LARP4	IMP		Human	PMID:21834987
Biological Process	GO:0045727	positive regulation of translation	LARP4	IMP		Human	PMID:21098120
Biological Process	GO:0010608	post-transcriptional regulation of gene expression	LARP4	IDA		Human	PMID:26001795
Biological Process	GO:0022604	regulation of cell morphogenesis	LARP4	IMP		Human	PMID:21834987

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern