Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LARP4B
  • Mouse genes Larp4b
  • Rat genes Larp4b
  • Zfish genes larp4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Larp4b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	LARP4B	IDA		Human	PMID:26001795
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P63244	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:E9KL35	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P63244	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P0C7T5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P63244	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q9Y5V3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:O75460-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P02489	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P14927	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P28331-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P41091	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P49591	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:P54652	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q01658	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q0VDC6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q8N2W9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q92876	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q9Y5Q9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q9Y5Z0	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	LARP4B	IPI	UniProtKB:Q9Y624	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	LARP4B	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	LARP4B	HDA		Human	PMID:22681889
Cellular Component	GO:0010494	cytoplasmic stress granule	LARP4B	IDA		Human	PMID:20573744
Cellular Component	GO:0005829	cytosol	LARP4B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	LARP4B	IDA		Human	PMID:20573744
Cellular Component	GO:0016020	membrane	LARP4B	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	LARP4B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0042788	polysomal ribosome	LARP4B	IDA		Human	PMID:20573744
Biological Process	GO:1905870	positive regulation of 3'-UTR-mediated mRNA stabilization	LARP4B	IMP		Human	PMID:26001795
Biological Process	GO:0045727	positive regulation of translation	LARP4B	IMP		Human	PMID:20573744

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern