Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LARP7
  • Mouse genes Larp7
  • Rat genes Larp7
  • Zfish genes larp7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Larp7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097322	7SK snRNA binding	LARP7	IDA		Human	PMID:18249148
Molecular Function	GO:0097322	7SK snRNA binding	LARP7	IDA		Human	PMID:18483487
Molecular Function	GO:0097322	7SK snRNA binding	LARP7	IDA		Human	PMID:27679474
Molecular Function	GO:0097322	7SK snRNA binding	LARP7	IDA		Human	PMID:28431135
Molecular Function	GO:0097322	7SK snRNA binding	LARP7	IDA		Human	PMID:29946027
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992	Human	PMID:18281698
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:18281698
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992	Human	PMID:18483487
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:18483487
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:20562857
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:23455922
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992	Human	PMID:25470060
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:26659056
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:Q5S007	Human	PMID:29513927
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:A0A142I5B9	Human	PMID:30177828
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992,UniProtKB:P50750,UniProtKB:Q7L2J0	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:O94992,UniProtKB:P50750,UniProtKB:Q9Y580	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P42285,UniProtKB:P50750	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750,UniProtKB:Q9Y580	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:Q9Y580	Human	PMID:30824372
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:Q15646	Human	PMID:30833792
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:Q5S007	Human	PMID:31046837
Molecular Function	GO:0005515	protein binding	LARP7	IPI	UniProtKB:P50750	Human	PMID:32707033
Molecular Function	GO:0003723	RNA binding	LARP7	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	LARP7	HDA		Human	PMID:22681889
Molecular Function	GO:0017070	U6 snRNA binding	LARP7	IDA		Human	PMID:32017898
Molecular Function	GO:0017070	U6 snRNA binding	Larp7	IMP		Mouse	MGI:MGI:6400674|PMID:32017896
Cellular Component	GO:0120259	7SK snRNP	LARP7	IDA		Human	PMID:18249148
Cellular Component	GO:0120259	7SK snRNP	LARP7	IDA		Human	PMID:18483487
Cellular Component	GO:0120259	7SK snRNP	LARP7	IDA		Human	PMID:28431135
Cellular Component	GO:0005829	cytosol	LARP7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	LARP7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	LARP7	IDA		Human	PMID:28254838
Cellular Component	GO:0005634	nucleus	Larp7	IDA		Mouse	MGI:MGI:6400674|PMID:32017896
Cellular Component	GO:1990904	ribonucleoprotein complex	LARP7	IDA		Human	PMID:19906723
Cellular Component	GO:1990904	ribonucleoprotein complex	LARP7	IDA		Human	PMID:28254838
Biological Process	GO:0000494	box C/D RNA 3'-end processing	LARP7	IMP		Human	PMID:32017898
Biological Process	GO:0000494	box C/D RNA 3'-end processing	Larp7	IMP		Mouse	MGI:MGI:6400674|PMID:32017896
Biological Process	GO:0061026	cardiac muscle tissue regeneration	larp7	IGI	ZFIN:ZDB-GENE-030131-321	Zfish	PMID:26542022
Biological Process	GO:0036093	germ cell proliferation	Larp7	IMP	MGI:MGI:5463352	Mouse	PMID:23154982
Biological Process	GO:0035562	negative regulation of chromatin binding	Larp7	IGI	MGI:MGI:106477	Mouse	PMID:23154982
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	LARP7	IMP		Human	PMID:18483487
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Larp7	IGI	MGI:MGI:106477	Mouse	PMID:23154982
Biological Process	GO:0032897	negative regulation of viral transcription	LARP7	IMP		Human	PMID:18249148
Biological Process	GO:0032897	negative regulation of viral transcription	LARP7	IMP		Human	PMID:18483487
Biological Process	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	Larp7	IMP		Mouse	PMID:23154982
Biological Process	GO:1904871	positive regulation of protein localization to Cajal body	LARP7	IDA		Human	PMID:28254838
Biological Process	GO:1905382	positive regulation of snRNA transcription by RNA polymerase II	LARP7	IDA		Human	PMID:28254838
Biological Process	GO:0060043	regulation of cardiac muscle cell proliferation	larp7	IGI	ZFIN:ZDB-GENE-030131-321	Zfish	PMID:26542022
Biological Process	GO:0048024	regulation of mRNA splicing, via spliceosome	LARP7	IMP		Human	PMID:32017898
Biological Process	GO:0048024	regulation of mRNA splicing, via spliceosome	Larp7	IMP		Mouse	MGI:MGI:6400674|PMID:32017896
Biological Process	GO:0007283	spermatogenesis	Larp7	IMP		Mouse	MGI:MGI:6400674|PMID:32017896
Biological Process	GO:1990438	U6 2'-O-snRNA methylation	LARP7	IMP		Human	PMID:32017898
Biological Process	GO:1990438	U6 2'-O-snRNA methylation	Larp7	IMP		Mouse	MGI:MGI:6400674|PMID:32017896

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern