Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LGSN
  • Mouse genes Lgsn
  • Rat genes Lgsn
  • Zfish genes lgsn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lgsn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Lgsn	IPI	PR:Q6NVD9	Mouse	PMID:18178558
Molecular Function	GO:0005515	protein binding	Lgsn	IPI	PR:P20152	Mouse	PMID:18178558
Cellular Component	GO:0005884	actin filament	lgsn	IDA		Zfish	PMID:18406404
Cellular Component	GO:0005886	plasma membrane	Lgsn	IDA		Mouse	PMID:18178558
Biological Process	GO:0030154	cell differentiation	lgsn	IMP	ZFIN:ZDB-MRPHLNO-080818-2	Zfish	PMID:18406404
Biological Process	GO:0030154	cell differentiation	lgsn	IMP	ZFIN:ZDB-MRPHLNO-080818-3	Zfish	PMID:18406404
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	lgsn	IMP	ZFIN:ZDB-MRPHLNO-080818-2	Zfish	PMID:18406404
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	lgsn	IMP	ZFIN:ZDB-MRPHLNO-080818-3	Zfish	PMID:18406404

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern