Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LIME1
  • Mouse genes Lime1
  • Rat genes Lime1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lime1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:O00526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:O14653	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:O15400	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:O43752	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:O95159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:P29972	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:P43378	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:P50402	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:P55061	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q05329	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q12982	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q13596	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q5BJF2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q5EB52	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q5QGT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q5SQN1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q8N661	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q8N912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q8TAF8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q8TD06	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q92982	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q969Z0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q96AL5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q96AN5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q96C03-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q96JW4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q96NL1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q99640-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9BRL7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9BU79	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9BXU9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9BZ67	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9H1C4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9H5X1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9NP61	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9NVS9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9NVV5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9NWW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9UBY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9ULP0-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9Y228	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LIME1	IPI	UniProtKB:Q9Y2E5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lime1	IPI	PR:Q60631	Mouse	PMID:16249387
Molecular Function	GO:0005515	protein binding	Lime1	IPI	PR:Q8CIH5	Mouse	PMID:16249387
Molecular Function	GO:0019901	protein kinase binding	Lime1	IPI	PR:P26450	Mouse	PMID:16249387
Molecular Function	GO:0019901	protein kinase binding	Lime1	IPI	PR:P25911	Mouse	PMID:16249387
Cellular Component	GO:0019815	B cell receptor complex	Lime1	IDA		Mouse	PMID:16249387
Cellular Component	GO:0005615	extracellular space	LIME1	HDA		Human	PMID:22664934
Biological Process	GO:0050853	B cell receptor signaling pathway	Lime1	IDA		Mouse	PMID:16249387
Biological Process	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	Lime1	IMP		Mouse	PMID:16249387
Biological Process	GO:0043405	regulation of MAP kinase activity	Lime1	IMP		Mouse	PMID:16249387
Biological Process	GO:1901222	regulation of NIK/NF-kappaB signaling	Lime1	IMP		Mouse	PMID:16249387
Biological Process	GO:0014066	regulation of phosphatidylinositol 3-kinase signaling	Lime1	IMP		Mouse	PMID:16249387
Biological Process	GO:0051279	regulation of release of sequestered calcium ion into cytosol	Lime1	IMP		Mouse	PMID:16249387
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Lime1	IMP		Mouse	PMID:16249387

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern