Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LMAN1
  • Mouse genes Lman1
  • Rat genes Lman1
  • Zfish genes lman1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lman1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Lman1	IDA		Rat	PMID:16257008|RGD:1600099
Molecular Function	GO:0046872	metal ion binding	LMAN1	EXP		Human	PMID:24498414
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q8NI22	Human	PMID:16304051
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q9BS26	Human	PMID:17805346
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q8NI22	Human	PMID:17971482
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:O15260	Human	PMID:18287528
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q8NI22	Human	PMID:19787799
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q8NI22	Human	PMID:20138881
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q8NI22	Human	PMID:20142513
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q15042|UniProtKB:Q9H2M9	Human	PMID:22337587
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q9BZV1	Human	PMID:22337587
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:Q12893	Human	PMID:24806965
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:P01009	Human	PMID:31142615
Molecular Function	GO:0005515	protein binding	LMAN1	IPI	UniProtKB:O75612	Human	PMID:9774442
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LMAN1	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LMAN1	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Lman1	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	Lman1	IDA		Mouse	PMID:19966784
Cellular Component	GO:0005783	endoplasmic reticulum	LMAN1	IDA		Human	PMID:19401338
Cellular Component	GO:0005783	endoplasmic reticulum	Lman1	IDA		Rat	PMID:8626736|RGD:70788
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	LMAN1	IDA		Human	PMID:15308636
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	LMAN1	IDA		Human	PMID:21525244
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Mouse	PMID:21187406
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Mouse	PMID:14728599
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Mouse	PMID:14645249
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Mouse	PMID:15452145
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Rat	PMID:16257008|RGD:1600099
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Lman1	IDA		Rat	PMID:19474315|RGD:8554250
Cellular Component	GO:0070062	extracellular exosome	LMAN1	HDA		Human	PMID:19199708
Cellular Component	GO:0005794	Golgi apparatus	Lman1	IDA		Mouse	PMID:11784862
Cellular Component	GO:0005794	Golgi apparatus	Lman1	IDA		Mouse	PMID:10787428
Cellular Component	GO:0005794	Golgi apparatus	Lman1	IDA		Rat	PMID:8626736|RGD:70788
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Lman1	IDA		Rat	PMID:8626736|RGD:70788
Cellular Component	GO:0016020	membrane	LMAN1	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	Lman1	IDA		Rat	PMID:8626736|RGD:70788
Cellular Component	GO:0030017	sarcomere	Lman1	IDA		Mouse	PMID:14728599
Biological Process	GO:0071391	cellular response to estrogen stimulus	lman1	IDA		Zfish	PMID:18618001
Biological Process	GO:0007029	endoplasmic reticulum organization	Lman1	IMP	MGI:MGI:4123879	Mouse	PMID:21795745
Biological Process	GO:0007030	Golgi organization	LMAN1	IMP		Human	PMID:18287528
Biological Process	GO:1903215	negative regulation of protein targeting to mitochondrion	LMAN1	HMP		Human	PMID:24270810
Biological Process	GO:0010638	positive regulation of organelle organization	LMAN1	IMP		Human	PMID:18287528
Biological Process	GO:0051238	sequestering of metal ion	LMAN1	EXP		Human	PMID:24498414

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern