Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LMOD3
  • Mouse genes Lmod3
  • Rat genes Lmod3
  • Zfish genes lmod3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lmod3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003785	actin monomer binding	LMOD3	IMP		Human	PMID:25250574
Molecular Function	GO:0005515	protein binding	LMOD3	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Lmod3	IPI	PR:Q9D783	Mouse	PMID:24960163
Molecular Function	GO:0005523	tropomyosin binding	LMOD3	IMP		Human	PMID:25250574
Cellular Component	GO:0031672	A band	Lmod3	IDA		Mouse	PMID:24960163
Cellular Component	GO:0005737	cytoplasm	LMOD3	IDA		Human	PMID:25250574
Cellular Component	GO:0031430	M band	LMOD3	IDA		Human	PMID:25250574
Cellular Component	GO:0005865	striated muscle thin filament	LMOD3	IDA		Human	PMID:25250574
Biological Process	GO:0045010	actin nucleation	LMOD3	IMP		Human	PMID:25250574
Biological Process	GO:0006936	muscle contraction	lmod3	IMP	ZFIN:ZDB-MRPHLNO-150211-1,ZFIN:ZDB-MRPHLNO-150305-1	Zfish	PMID:25250574
Biological Process	GO:0048743	positive regulation of skeletal muscle fiber development	LMOD3	IMP		Human	PMID:25250574
Biological Process	GO:0048741	skeletal muscle fiber development	Lmod3	IMP		Mouse	MGI:MGI:5648755|PMID:26035871
Biological Process	GO:0048741	skeletal muscle fiber development	Lmod3	IMP		Mouse	MGI:MGI:5644091|PMID:25774500
Biological Process	GO:0030240	skeletal muscle thin filament assembly	LMOD3	IMP		Human	PMID:25250574
Biological Process	GO:0030240	skeletal muscle thin filament assembly	lmod3	IMP	ZFIN:ZDB-MRPHLNO-150211-1,ZFIN:ZDB-MRPHLNO-150305-1	Zfish	PMID:25250574
Biological Process	GO:0006941	striated muscle contraction	LMOD3	IMP		Human	PMID:25250574

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern