Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LRRC15
  • Mouse genes Lrrc15
  • Rat genes Lrrc15
  • Zfish genes lrrc15
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lrrc15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005518	collagen binding	LRRC15	IDA		Human	PMID:16098915
Molecular Function	GO:0001968	fibronectin binding	LRRC15	IDA		Human	PMID:16098915
Molecular Function	GO:0043236	laminin binding	LRRC15	IDA		Human	PMID:16098915
Cellular Component	GO:0009986	cell surface	Lrrc15	IDA		Rat	PMID:11785964|RGD:70253
Cellular Component	GO:0062023	collagen-containing extracellular matrix	LRRC15	IDA		Human	PMID:16098915
Cellular Component	GO:0070062	extracellular exosome	LRRC15	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	LRRC15	HDA		Human	PMID:23533145
Biological Process	GO:1903077	negative regulation of protein localization to plasma membrane	LRRC15	IMP		Human	PMID:18385238
Biological Process	GO:0030335	positive regulation of cell migration	LRRC15	IMP		Human	PMID:16098915
Biological Process	GO:0046813	receptor-mediated virion attachment to host cell	LRRC15	IMP		Human	PMID:18385238

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern