Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LYPD3
  • Mouse genes Lypd3
  • Rat genes Lypd3
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lypd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043236	laminin binding	Lypd3	IDA		Rat	PMID:15729693|RGD:8553808
Cellular Component	GO:0005615	extracellular space	LYPD3	HDA		Human	PMID:16502470
Cellular Component	GO:0016020	membrane	Lypd3	IDA		Rat	PMID:15729693|RGD:8553808
Cellular Component	GO:0016020	membrane	Lypd3	IDA		Rat	PMID:9788443|RGD:68667
Biological Process	GO:0007160	cell-matrix adhesion	Lypd3	IDA		Rat	PMID:15729693|RGD:8553808
Biological Process	GO:0034392	negative regulation of smooth muscle cell apoptotic process	LYPD3	IGI	RNAcentral:URS00003E47B1_9606	Human	PMID:32151690

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern