Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LYRM7
  • Mouse genes Lyrm7
  • Rat genes Lyrm7
  • Zfish genes lyrm7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lyrm7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:P47985	Human	PMID:23168492
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:Q8IWL3	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:P47985	Human	PMID:27499296
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:P47985	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:Q8IWL3	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	LYRM7	IPI	UniProtKB:P21673	Human	PMID:32296183
Cellular Component	GO:0005759	mitochondrial matrix	LYRM7	IDA		Human	PMID:23168492
Cellular Component	GO:0031966	mitochondrial membrane	LYRM7	IDA		Human	PMID:23168492
Cellular Component	GO:0005739	mitochondrion	Lyrm7	HDA		Mouse	PMID:18614015
Biological Process	GO:0045333	cellular respiration	LYRM7	IDA		Human	PMID:23168492
Biological Process	GO:0034551	mitochondrial respiratory chain complex III assembly	LYRM7	IDA		Human	PMID:23168492

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern