Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Map1b

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes MAP1B
- Mouse genes Map1b
- Rat genes Map1b
- Zfish genes map1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Map1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	Map1b	IDA		Rat	PMID:11896150\|RGD:71122
Molecular Function	GO:0008017	microtubule binding	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Molecular Function	GO:0008017	microtubule binding	Map1b	IMP		Rat	PMID:11896150\|RGD:71122
Molecular Function	GO:0005543	phospholipid binding	Map1b	IPI	PubChem_Compound:6323481\|PubChem_Compound:5287505\|CHEBI:28765	Rat	PMID:9278459\|RGD:2304031
Molecular Function	GO:0005515	protein binding	MAP1B	IPI	UniProtKB:Q9H2C0	Human	PMID:12147674
Molecular Function	GO:0005515	protein binding	MAP1B	IPI	UniProtKB:Q8NFB2	Human	PMID:15525354
Molecular Function	GO:0005515	protein binding	MAP1B	IPI	UniProtKB:P04637	Human	PMID:18656471
Molecular Function	GO:0005515	protein binding	MAP1B	IPI	UniProtKB:Q9GZQ8	Human	PMID:24089205
Molecular Function	GO:0005515	protein binding	MAP1B	IPI	UniProtKB:P50406	Human	PMID:24614691
Molecular Function	GO:0005515	protein binding	Map1b	IPI	UniProtKB:Q9UPY8	Mouse	MGI:MGI:5496973\|PMID:23572079
Molecular Function	GO:0005515	protein binding	Map1b	IPI	UniProtKB:Q9WTU3	Mouse	MGI:MGI:5487502\|PMID:22474336
Molecular Function	GO:0005515	protein binding	Map1b	IPI	UniProtKB:Q61166	Mouse	MGI:MGI:5496973\|PMID:23572079
Molecular Function	GO:0005515	protein binding	Map1b	IPI	PR:Q9Z273	Mouse	PMID:24664738
Molecular Function	GO:0005515	protein binding	Map1b	IPI	PR:Q9EQ61	Mouse	PMID:17308336
Molecular Function	GO:0005515	protein binding	Map1b	IPI	RGD:3035	Rat	PMID:11733546\|RGD:2304025
Molecular Function	GO:0005515	protein binding	Map1b	IPI	RGD:621869	Rat	PMID:16244178\|RGD:9850088
Molecular Function	GO:0005515	protein binding	Map1b	IPI	UniProtKB:P31388	Rat	PMID:24614691\|RGD:11055045
Molecular Function	GO:0005515	protein binding	Map1b	IPI	RGD:621315	Rat	PMID:7908909\|RGD:633201
Molecular Function	GO:0044877	protein-containing complex binding	Map1b	IDA		Rat	PMID:2470876\|RGD:2304044
Cellular Component	GO:0097440	apical dendrite	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0030424	axon	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0030424	axon	Map1b	IDA		Rat	PMID:28426968\|RGD:13514087
Cellular Component	GO:0030424	axon	Map1b	IDA		Rat	PMID:28521134\|RGD:13441203
Cellular Component	GO:0030424	axon	Map1b	IDA		Rat	PMID:7908909\|RGD:633201
Cellular Component	GO:0097441	basal dendrite	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0005856	cytoskeleton	Map1b	IDA		Rat	PMID:17151949\|RGD:2304009
Cellular Component	GO:0005829	cytosol	MAP1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	Map1b	IDA		Mouse	PMID:16885219
Cellular Component	GO:0030425	dendrite	Map1b	IDA		Mouse	MGI:MGI:5632407\|PMID:25788676
Cellular Component	GO:0030425	dendrite	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0030425	dendrite	Map1b	IDA		Rat	PMID:28521134\|RGD:13441203
Cellular Component	GO:0030425	dendrite	Map1b	IDA		Rat	PMID:7908909\|RGD:633201
Cellular Component	GO:0030426	growth cone	Map1b	IDA		Rat	PMID:17870250\|RGD:2304008
Cellular Component	GO:0097457	hippocampal mossy fiber	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0005874	microtubule	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0005875	microtubule associated complex	Map1b	IDA		Rat	PMID:11896150\|RGD:71122
Cellular Component	GO:0005875	microtubule associated complex	Map1b	IDA		Rat	PMID:7908909\|RGD:633201
Cellular Component	GO:0043025	neuronal cell body	Map1b	IDA		Mouse	MGI:MGI:5632407\|PMID:25788676
Cellular Component	GO:0043025	neuronal cell body	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0043025	neuronal cell body	Map1b	IDA		Rat	PMID:7908909\|RGD:633201
Cellular Component	GO:0043204	perikaryon	Map1b	IDA		Rat	PMID:14964776\|RGD:2304011
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Map1b	IDA		Rat	PMID:12410592\|RGD:2304022
Cellular Component	GO:0001750	photoreceptor outer segment	Map1b	IDA		Mouse	PMID:24664738
Cellular Component	GO:0005886	plasma membrane	MAP1B	IDA		Human	PMID:19567321
Cellular Component	GO:0005886	plasma membrane	Map1b	IDA		Rat	PMID:17151949\|RGD:2304009
Cellular Component	GO:0014069	postsynaptic density	Map1b	IDA		Mouse	PMID:17114649
Cellular Component	GO:0014069	postsynaptic density	Map1b	IDA		Rat	PMID:14964776\|RGD:2304011
Cellular Component	GO:0036477	somatodendritic compartment	Map1b	IDA		Rat	PMID:10640627\|RGD:13464259
Cellular Component	GO:0043196	varicosity	Map1b	IDA		Rat	PMID:11733546\|RGD:2304025
Biological Process	GO:0048675	axon extension	Map1b	IMP	MGI:MGI:2148182	Mouse	PMID:16536727
Biological Process	GO:0007409	axonogenesis	Map1b	IGI	MGI:MGI:97180	Mouse	PMID:11891784
Biological Process	GO:0071363	cellular response to growth factor stimulus	Map1b	IEP		Rat	PMID:9473667\|RGD:2304027
Biological Process	GO:0071375	cellular response to peptide hormone stimulus	Map1b	IEP		Rat	PMID:9473667\|RGD:2304027
Biological Process	GO:0016358	dendrite development	Map1b	IMP	MGI:MGI:2152588	Mouse	PMID:11581286
Biological Process	GO:0021700	developmental maturation	Map1b	IEP		Rat	PMID:12002439\|RGD:2304023
Biological Process	GO:0061162	establishment of monopolar cell polarity	Map1b	IMP		Mouse	PMID:11029282
Biological Process	GO:0051915	induction of synaptic plasticity by chemical substance	Map1b	IEP		Rat	PMID:15374099\|RGD:2304033
Biological Process	GO:0046907	intracellular transport	Map1b	IMP	MGI:MGI:2148182	Mouse	PMID:16536727
Biological Process	GO:0001578	microtubule bundle formation	Map1b	IMP	MGI:MGI:2152588	Mouse	PMID:11581286
Biological Process	GO:0001578	microtubule bundle formation	Map1b	IDA		Rat	PMID:11896150\|RGD:71122
Biological Process	GO:0000226	microtubule cytoskeleton organization	map1b	IMP	ZFIN:ZDB-MRPHLNO-160331-3	Zfish	PMID:26782621
Biological Process	GO:0047497	mitochondrion transport along microtubule	Map1b	IMP	MGI:MGI:2148182	Mouse	PMID:16536727
Biological Process	GO:0032387	negative regulation of intracellular transport	Map1b	IMP	MGI:MGI:2148182	Mouse	PMID:16536727
Biological Process	GO:0007026	negative regulation of microtubule depolymerization	Map1b	IDA		Rat	PMID:11896150\|RGD:71122
Biological Process	GO:0007399	nervous system development	Map1b	IEP		Rat	PMID:9260743\|RGD:2304032
Biological Process	GO:0001840	neural plate development	map1b	IMP	ZFIN:ZDB-MRPHLNO-160331-3	Zfish	PMID:26782621
Biological Process	GO:0021915	neural tube development	map1b	IMP	ZFIN:ZDB-MRPHLNO-160331-3	Zfish	PMID:26782621
Biological Process	GO:0048666	neuron development	Map1b	IEP		Rat	PMID:17870250\|RGD:2304008
Biological Process	GO:0031175	neuron projection development	MAP1B	IMP		Human	PMID:33268592
Biological Process	GO:0071895	odontoblast differentiation	MAP1B	IDA		Human	PMID:19567321
Biological Process	GO:0014012	peripheral nervous system axon regeneration	Map1b	IEP		Rat	PMID:10924960\|RGD:2304028
Biological Process	GO:0045773	positive regulation of axon extension	Map1b	IMP		Rat	PMID:8838670\|RGD:2304034
Biological Process	GO:0031116	positive regulation of microtubule polymerization	Map1b	IDA		Rat	PMID:11896150\|RGD:71122
Biological Process	GO:0045666	positive regulation of neuron differentiation	Map1b	IMP		Rat	PMID:8450955\|RGD:2304228
Biological Process	GO:0031114	regulation of microtubule depolymerization	map1b	IMP	ZFIN:ZDB-MRPHLNO-160331-3	Zfish	PMID:26782621
Biological Process	GO:0048678	response to axon injury	Map1b	IEP		Rat	PMID:17880387\|RGD:2304007
Biological Process	GO:0009743	response to carbohydrate	Map1b	IEP		Rat	PMID:16219303\|RGD:2304010
Biological Process	GO:0009743	response to carbohydrate	Map1b	IEP		Rat	PMID:8592116\|RGD:2304035
Biological Process	GO:0032355	response to estradiol	Map1b	IEP		Rat	PMID:14572470\|RGD:2304014
Biological Process	GO:0010035	response to inorganic substance	Map1b	IEP		Rat	PMID:12410592\|RGD:2304022
Biological Process	GO:0017085	response to insecticide	Map1b	IEP		Rat	PMID:18417317\|RGD:2304006
Biological Process	GO:0009612	response to mechanical stimulus	Map1b	IEP		Rat	PMID:10906717\|RGD:2304029
Biological Process	GO:0031667	response to nutrient levels	Map1b	IEP		Rat	PMID:9370057\|RGD:2304030
Biological Process	GO:0033189	response to vitamin A	Map1b	IEP		Rat	PMID:12414111\|RGD:2304021
Biological Process	GO:0009611	response to wounding	Map1b	IEP		Rat	PMID:10924960\|RGD:2304028
Biological Process	GO:0009410	response to xenobiotic stimulus	Map1b	IEP		Rat	PMID:12598335\|RGD:2304015
Biological Process	GO:0009410	response to xenobiotic stimulus	Map1b	IEP		Rat	PMID:3252178\|RGD:2304042
Biological Process	GO:0007416	synapse assembly	Map1b	IEP		Rat	PMID:17151949\|RGD:2304009

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 08/02/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.