Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MARCHF2
  • Mouse genes Marchf2
  • Rat genes Marchf2
  • Zfish genes marchf2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Marchf2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q12959	Human	PMID:17980554
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P07550	Human	PMID:23166351
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:O43752	Human	PMID:23818989
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P13569	Human	PMID:23818989
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9HD26	Human	PMID:23818989
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q5T700	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q8N205	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q8N6L0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q969F0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9Y282	Human	PMID:31142615
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q5T700	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:O00623	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:O95859	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P13236	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P15941-11	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q4KMG9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q5T700	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q5TGU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q7Z7N9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q8N661	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q8WWF3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q969F0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q96BA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q96GM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9BVX2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9BXB1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9NY72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9Y624	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MARCHF2	IPI	UniProtKB:Q9Y6K9	Human	PMID:32935379
Molecular Function	GO:0005515	protein binding	Marchf2	IPI	UniProtKB:O88522	Mouse	MGI:MGI:6472811|PMID:32935379
Molecular Function	GO:0061630	ubiquitin protein ligase activity	MARCHF2	IDA		Human	PMID:14722266
Molecular Function	GO:0061630	ubiquitin protein ligase activity	MARCHF2	IMP		Human	PMID:17980554
Molecular Function	GO:0061630	ubiquitin protein ligase activity	MARCHF2	IMP		Human	PMID:31142615
Cellular Component	GO:0005737	cytoplasm	MARCHF2	IDA		Human	PMID:32935379
Cellular Component	GO:0031410	cytoplasmic vesicle	MARCHF2	IDA		Human	PMID:14722266
Cellular Component	GO:0005829	cytosol	MARCHF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	MARCHF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	MARCHF2	IDA		Human	PMID:14722266
Cellular Component	GO:0000139	Golgi membrane	MARCHF2	IDA		Human	PMID:23818989
Cellular Component	GO:0005886	plasma membrane	MARCHF2	IDA		Human	PMID:32935379
Biological Process	GO:0140367	antibacterial innate immune response	Marchf2	IMP		Mouse	MGI:MGI:6472811|PMID:32935379
Biological Process	GO:0140374	antiviral innate immune response	Marchf2	IMP		Mouse	MGI:MGI:6472811|PMID:32935379
Biological Process	GO:0030097	hemopoiesis	marchf2	IMP	ZFIN:ZDB-MRPHLNO-110607-4	Zfish	PMID:21571218
Biological Process	GO:1905167	positive regulation of lysosomal protein catabolic process	MARCHF2	IMP		Human	PMID:29573664
Biological Process	GO:0016567	protein ubiquitination	MARCHF2	IDA		Human	PMID:14722266
Biological Process	GO:0016567	protein ubiquitination	MARCHF2	IMP		Human	PMID:32935379
Biological Process	GO:0044790	suppression of viral release by host	MARCHF2	IMP		Human	PMID:29573664

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern