Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MATN2
  • Mouse genes Matn2
  • Rat genes Matn2
  • Zfish genes matn4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Matn2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	MATN2	IPI	UniProtKB:O00555	Human	PMID:21078624
Molecular Function	GO:0005515	protein binding	MATN2	IPI	UniProtKB:O15265	Human	PMID:21078624
Molecular Function	GO:0005515	protein binding	MATN2	IPI	UniProtKB:O68704	Human	PMID:21911467
Cellular Component	GO:0005604	basement membrane	Matn2	IDA		Mouse	PMID:19295126
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MATN2	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MATN2	HDA		Human	PMID:23979707
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MATN2	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MATN2	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MATN2	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Matn2	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Matn2	IDA		Mouse	MGI:MGI:1336568|PMID:10224097
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Matn2	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0031012	extracellular matrix	Matn2	IDA		Mouse	PMID:11102754
Cellular Component	GO:0005615	extracellular space	Matn2	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0120216	matrilin complex	Matn2	IPI		Mouse	MGI:MGI:1336568|PMID:10224097
Biological Process	GO:0007411	axon guidance	Matn2	IGI	MGI:MGI:99912	Mouse	PMID:19295126
Biological Process	GO:0007411	axon guidance	Matn2	IGI	MGI:MGI:99916	Mouse	PMID:19295126
Biological Process	GO:0031104	dendrite regeneration	Matn2	IMP	MGI:MGI:3050541	Mouse	PMID:19295126
Biological Process	GO:0008347	glial cell migration	Matn2	IDA		Mouse	PMID:19295126
Biological Process	GO:0001764	neuron migration	Matn2	IDA		Mouse	PMID:19295126
Biological Process	GO:0031175	neuron projection development	Matn2	IDA		Mouse	PMID:19295126
Biological Process	GO:0048678	response to axon injury	Matn2	IMP	MGI:MGI:3050541	Mouse	PMID:19295126

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern