Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MATR3
  • Mouse genes Matr3
  • Rat genes Matr3
  • Zfish genes matr3l1.1,matr3l1.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Matr3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	MATR3	IPI	UniProtKB:P43243	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	MATR3	IPI	UniProtKB:P43243	Human	PMID:32296183
Molecular Function	GO:0035198	miRNA binding	MATR3	IDA		Human	PMID:28431233
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P61978	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9NRI5	Human	PMID:17043677
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9UKV8	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9UL18	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P34969	Human	PMID:19486527
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P22736	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P61978	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9Y272	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P42858	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P61978-2	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P35637	Human	PMID:27731383
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9NRI5	Human	PMID:29961565
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P34969	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9NRI5	Human	PMID:31413325
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P57721-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P61978-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q13077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q58EX7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9BZW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9UKA9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q9Y272	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	MATR3	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	MATR3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	MATR3	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	Matr3	IDA		Rat	PMID:16814881|RGD:9685337
Cellular Component	GO:0016020	membrane	MATR3	HDA		Human	PMID:19946888
Cellular Component	GO:0016363	nuclear matrix	Matr3	IDA		Rat	PMID:2033075|RGD:69882
Cellular Component	GO:0005634	nucleus	Matr3	IDA		Mouse	PMID:25574029
Cellular Component	GO:0005634	nucleus	Matr3	IDA		Rat	PMID:16814881|RGD:9685337
Biological Process	GO:0002218	activation of innate immune response	MATR3	IDA		Human	PMID:28712728
Biological Process	GO:0001825	blastocyst formation	Matr3	IMP		Mouse	PMID:27869233
Biological Process	GO:0003170	heart valve development	Matr3	IMP		Mouse	PMID:25574029
Biological Process	GO:0010608	post-transcriptional regulation of gene expression	MATR3	IDA		Human	PMID:21771347
Biological Process	GO:0003281	ventricular septum development	Matr3	IMP		Mouse	PMID:25574029

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern