Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MDC1
  • Mouse genes Mdc1
  • Rat genes Mdc1
  • Zfish genes mdc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mdc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:12607005
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:12607005
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P38398	Human	PMID:12607005
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q13315	Human	PMID:12607005
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q06609	Human	PMID:16186822
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:16377563
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P38398	Human	PMID:17525332
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:18001824
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O76064	Human	PMID:18001824
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:18001824
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O76064	Human	PMID:18001825
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:18001825
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:18583988
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:18583988
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:18678890
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:19234442
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O43070	Human	PMID:19804756
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:19804756
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q7Z2E3	Human	PMID:20008512
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:20159462
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:20224574
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O96028	Human	PMID:21293379
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O96028-1	Human	PMID:21293379
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P16104	Human	PMID:21293379
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O76064-1	Human	PMID:24240613
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:25064736
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:O60934	Human	PMID:29656893
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:P38398	Human	PMID:29656893
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q13315	Human	PMID:29656893
Molecular Function	GO:0005515	protein binding	MDC1	IPI	UniProtKB:Q99816	Human	PMID:35044719
Cellular Component	GO:0005694	chromosome	Mdc1	IDA		Mouse	MGI:MGI:5465514|PMID:23039116
Cellular Component	GO:0005925	focal adhesion	MDC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	MDC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	MDC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	MDC1	IDA		Human	PMID:15604234
Cellular Component	GO:0005634	nucleus	MDC1	IDA		Human	PMID:24217620
Cellular Component	GO:0005634	nucleus	MDC1	IDA		Human	PMID:24550317

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern